Myb-related transcription factor involved in regulating basal and induced expression of genes of the purine and histidine biosynthesis pathways
Myb
BATF
Hocomoco
M00020
human, Homo sapiens.
Bbx
UniPROBE
UP00012
Mus musculus
bobby sox homolog (Drosophila)
HMG_box
bcd
Jaspar
MA0212.1
Drosophila melanogaster
Helix-Turn-Helix
Bcd
Transfac
M00140
Drosophila melanogaster
Bicoid
Bcd_Cell_FBgn0000166
Fly_Factor_Survey
Drosophila melanogaster
bcd_FlyReg_FBgn0000166
Fly_Factor_Survey
Drosophila melanogaster
bcd_NAR_FBgn0000166
Fly_Factor_Survey
Drosophila melanogaster
Bcd_SOLEXA_FBgn0000166
Fly_Factor_Survey
Drosophila melanogaster
BCL6
Hocomoco
M00021
human, Homo sapiens.
Bcl6b
UniPROBE
UP00043
Mus musculus
B-cell CLL/lymphoma 6; member B: Mus musculus B-cell CLL/lymphoma 6; member B; mRNA
zf-C2H2
BH1_Cell_FBgn0011758
Fly_Factor_Survey
Drosophila melanogaster
BH1_SOLEXA_FBgn0011758
Fly_Factor_Survey
Drosophila melanogaster
BH2_Cell_FBgn0004854
Fly_Factor_Survey
Drosophila melanogaster
BH2_SOLEXA_FBgn0004854
Fly_Factor_Survey
Drosophila melanogaster
BHE40
Hocomoco
M00022
human, Homo sapiens.
BHE41
Hocomoco
M00023
human, Homo sapiens.
bHLH_family.p2
SwissRegulon
Homo sapiens; Mus musculus
aryl hydrocarbon receptor nuclear translocator-like;microphthalmia-associated transcription factor;MAX interactor 1;transcription factor binding to IGHM enhancer 3;KAT;NM_005806;NM_006454;bHLHb32;1.000;51085;HES6;MAX dimerization protein 3
Bhlhb2
UniPROBE
UP00050
Mus musculus
basic helix-loop-helix domain containing; class B2: Mus musculus basic helix-loop-helix domain containing; class B2
HLH
bin_FlyReg_FBgn0045759
Fly_Factor_Survey
Drosophila melanogaster
bin_SANGER_5_FBgn0045759
Fly_Factor_Survey
Drosophila melanogaster
Blimp-1_NAR_FBgn0035625
Fly_Factor_Survey
Drosophila melanogaster
Blimp-1_SANGER_5_FBgn0035625
Fly_Factor_Survey
Drosophila melanogaster
Blimp-1_SOLEXA_FBgn0035625
Fly_Factor_Survey
Drosophila melanogaster
BMAL1
Hocomoco
M00024
human, Homo sapiens.
bowl_SANGER_5_FBgn0004893
Fly_Factor_Survey
Drosophila melanogaster
bowl_SOLEXA_FBgn0004893
Fly_Factor_Survey
Drosophila melanogaster
BPTF
Hocomoco
M00025
human, Homo sapiens.
BPTF.p2
SwissRegulon
Homo sapiens; Mus musculus
bromodomain PHD finger transcription factor
br_SANGER_10_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br_SOLEXA_10_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br_Z1
Jaspar
MA0010.1
Drosophila melanogaster
Zinc-coordinating
br_Z2
Jaspar
MA0011.1
Drosophila melanogaster
Zinc-coordinating
br_Z3
Jaspar
MA0012.1
Drosophila melanogaster
Zinc-coordinating
br_Z4
Jaspar
MA0013.1
Drosophila melanogaster
Zinc-coordinating
BR-C
Transfac
M00091
Drosophila melanogaster
Broad-Complex Z1
BR-C
Transfac
M00092
Drosophila melanogaster
Broad-Complex Z2
BR-C
Transfac
M00093
Drosophila melanogaster
Broad-Complex Z3
BR-C
Transfac
M00094
Drosophila melanogaster
Broad-Complex Z4
br-PA_SANGER_5_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-PA_SOLEXA_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-PE_SANGER_5_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-PE_SOLEXA_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-PL_SANGER_5_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-PL_SOLEXA_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-Z1_FlyReg_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-Z2_FlyReg_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-Z3_FlyReg_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
br-Z4_FlyReg_FBgn0000210
Fly_Factor_Survey
Drosophila melanogaster
BRAC
Hocomoco
M00026
human, Homo sapiens.
Brachyury
Transfac
M00150
Mus musculus
Brachyury
BRCA1
Jaspar
MA0133.1
Homo sapiens
Other
BRCA1
Hocomoco
M00027
human, Homo sapiens.
brk
Jaspar
MA0213.1
Drosophila melanogaster
Helix-Turn-Helix
brk_FlyReg_FBgn0024250
Fly_Factor_Survey
Drosophila melanogaster
Brn-2
Transfac
M00145
Homo sapiens
POU factor Brn-2
bsh
Jaspar
MA0214.1
Drosophila melanogaster
Helix-Turn-Helix
Bsh_Cell_FBgn0000529
Fly_Factor_Survey
Drosophila melanogaster
Bsh_SOLEXA_FBgn0000529
Fly_Factor_Survey
Drosophila melanogaster
Bsx
UniPROBE
UP00138
Mus musculus
brain specific homeobox
Homeo
BtbVII_SANGER_5_FBgn0012049
Fly_Factor_Survey
Drosophila melanogaster
btd
Jaspar
MA0443.1
Drosophila melanogaster
Zinc-coordinating
btd_NAR_FBgn0000233
Fly_Factor_Survey
Drosophila melanogaster
Bteb2_SANGER_2.5_FBgn0025679
Fly_Factor_Survey
Drosophila melanogaster
Bteb2_SOLEXA_2.5_FBgn0025679
Fly_Factor_Survey
Drosophila melanogaster
btn
Jaspar
MA0215.1
Drosophila melanogaster
Helix-Turn-Helix
Btn_Cell_FBgn0014949
Fly_Factor_Survey
Drosophila melanogaster
Btn_SOLEXA_FBgn0014949
Fly_Factor_Survey
Drosophila melanogaster
byn_FlyReg_FBgn0011723
Fly_Factor_Survey
Drosophila melanogaster
bZIP910
Jaspar
MA0096.1
Antirrhinum majus
Zipper-Type
bZIP910
Transfac
M00356
Antirrhinum majus
bZIP transcription factor from Antirrhinum majus
bZIP910
Transfac
M00357
Antirrhinum majus
bZIP transcription factor from Antirrhinum majus
bZIP911
Jaspar
MA0097.1
Antirrhinum majus
Zipper-Type
bZIP911
Transfac
M00358
Antirrhinum majus
bZIP transcription factor from Antirrhinum majus
bZIP911
Transfac
M00359
Antirrhinum majus
bZIP transcription factor from Antirrhinum majus
c-Ets-1(p54)
Transfac
M00032
Mus musculus
c-Ets-1(p54)
c-Ets-1(p54)
Transfac
M00074
Gallus gallus
c-Ets-1(p54)
c-Myb
Transfac
M00004
Mus musculus
c-Myb
c-Myb
Transfac
M00183
Homo sapiens
c-Myb
c-Myc:Max
Transfac
M00118
Homo sapiens
c-Myc:Max heterodimer
c-Myc:Max
Transfac
M00123
Homo sapiens
c-Myc:Max heterodimer
c-Myc:Max
Transfac
M00615
Homo sapiens
c-Myc:Max heterodimer
c-Rel
Transfac
M00053
Homo sapiens
c-Rel
C/EBP
Transfac
M00159
Xenopus laevis
CCAAT/enhancer binding protein
C/EBP
Transfac
M00190
Xenopus laevis
CCAAT/enhancer binding factor
C/EBP
Transfac
M00201
Mus musculus
C/EBP binding site
C/EBPalpha
Transfac
M00116
Xenopus laevis
CCAAT/enhancer binding protein alpha
C/EBPbeta
Transfac
M00109
Homo sapiens
CCAAT/enhancer binding protein beta
C/EBPbeta
Transfac
M00117
Homo sapiens
CCAAT/enhancer binding protein beta
C15
Jaspar
MA0170.1
Drosophila melanogaster
Helix-Turn-Helix
C15_Cell_FBgn0004863
Fly_Factor_Survey
Drosophila melanogaster
C15_SOLEXA_FBgn0004863
Fly_Factor_Survey
Drosophila melanogaster
cad
Jaspar
MA0216.1
Drosophila melanogaster
Helix-Turn-Helix
Cad_Cell_FBgn0000251
Fly_Factor_Survey
Drosophila melanogaster
cad_FlyReg_FBgn0000251
Fly_Factor_Survey
Drosophila melanogaster
Cad_SOLEXA_FBgn0000251
Fly_Factor_Survey
Drosophila melanogaster
CAD1
Jaspar
MA0279.1
Saccharomyces cerevisiae
Zipper-Type
cap
Transfac
M00253
cap signal for transcription initiation
Cart-1
Transfac
M00416
Homo sapiens
Cart-1 (cartilage homeoprotein 1)
Cart1
UniPROBE
UP00209
Mus musculus
cartilage homeo protein 1
Homeo
CAT8
Jaspar
MA0280.1
Saccharomyces cerevisiae
Zinc-coordinating
cato_da_SANGER_10_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
cato_da_SANGER_10_FBgn0024249
Fly_Factor_Survey
Drosophila melanogaster
caup
Jaspar
MA0217.1
Drosophila melanogaster
Helix-Turn-Helix
Caup_Cell_FBgn0015919
Fly_Factor_Survey
Drosophila melanogaster
Caup_SOLEXA_FBgn0015919
Fly_Factor_Survey
Drosophila melanogaster
CBF1
Jaspar
MA0281.1
Saccharomyces cerevisiae
Zipper-Type
Cbf1
UniPROBE
UP00397
Saccharomyces cerevisiae
Helix-loop-helix protein that binds the motif CACRTG; which is present at several sites including MET gene promoters and centromere DNA element I (CDEI); required for nucleosome positioning at this motif; targets Isw1p to DNA
HLH
CCAAT
Transfac
M00200
Retroviral CCAAT box
CCAAT
Transfac
M00254
cellular and viral CCAAT box
CDC5
Transfac
M00361
Arabidopsis thaliana
transcriptional activator
Cdc5
Transfac
M00478
Homo sapiens
cell division control protein 5
CDC5L
Hocomoco
M00028
human, Homo sapiens.
CDC5L.p2
SwissRegulon
Homo sapiens; Mus musculus
CDC5 cell division cycle 5-like (S. pombe)
CDP
Transfac
M00095
Homo sapiens
cut-like homeodomain protein
CDP
Transfac
M00102
Homo sapiens
transcriptional repressor CDP
CDP
Transfac
M00104
Homo sapiens
cut-like homeodomain protein
CDP
Transfac
M00105
Homo sapiens
cut-like homeodomain protein
CDP
Transfac
M00106
Homo sapiens
cut-like homeodomain protein
Cdx1
UniPROBE
UP00240
Mus musculus
caudal type homeo box 1
Homeo
CDX1
Hocomoco
M00029
human, Homo sapiens.
CDX1-2-4.p2
SwissRegulon
Homo sapiens; Mus musculus
caudal type homeobox 1;caudal type homeobox 2;caudal type homeobox 4
Cdx2
UniPROBE
UP00133
Mus musculus
caudal type homeo box 2
Homeo
CDX2
Hocomoco
M00030
human, Homo sapiens.
CdxA
Transfac
M00100
Gallus gallus
CdxA
CdxA
Transfac
M00101
Gallus gallus
CdxA
CEBPA
Jaspar
MA0102.2
Zipper-Type
CEBPA
Hocomoco
M00031
human, Homo sapiens.
CEBPA-B_DDIT3.p2
SwissRegulon
Homo sapiens; Mus musculus
DNA-damage-inducible transcript 3;CCAAT/enhancer binding protein (C/EBP); alpha;CCAAT/enhancer binding protein (C/EBP); beta
CEBPB
Hocomoco
M00032
human, Homo sapiens.
CEBPD
Hocomoco
M00033
human, Homo sapiens.
CEBPE
Hocomoco
M00034
human, Homo sapiens.
CEBPG
Hocomoco
M00035
human, Homo sapiens.
CEBPZ
Hocomoco
M00036
human, Homo sapiens.
ceh-22
Jaspar
MA0264.1
Caenorhabditis elegans
Helix-Turn-Helix
CEH-22
UniPROBE
UP00396
Caenorhabditis elegans
Homeobox protein ceh-22: C.Elegans Homeobox
Homeo
CEP3
Jaspar
MA0282.1
Saccharomyces cerevisiae
Zinc-coordinating
Cep3
UniPROBE
UP00278
Saccharomyces cerevisiae
Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain; a C-terminal acidic domain; and ...
Zn2Cys6
ces-2
Transfac
M00398
cell-death specification 2
CF1
Transfac
M00111
Drosophila melanogaster
chorion factor 1
CF1
Transfac
M00112
Drosophila melanogaster
chorion factor 1
Cf2_II
Jaspar
MA0015.1
Drosophila melanogaster
Zinc-coordinating
CF2-II
Transfac
M00012
Drosophila melanogaster
CF2-II
CF2-II
Transfac
M00013
Drosophila melanogaster
CF2-II
Cf2-II_FlyReg_FBgn0000286
Fly_Factor_Survey
Drosophila melanogaster
Cf2-PA_SANGER_2.5_FBgn0000286
Fly_Factor_Survey
Drosophila melanogaster
Cf2-PA_SOLEXA_FBgn0000286
Fly_Factor_Survey
Drosophila melanogaster
Cf2-PB_SANGER_5_FBgn0000286
Fly_Factor_Survey
Drosophila melanogaster
Cf2-PB_SOLEXA_FBgn0000286
Fly_Factor_Survey
Drosophila melanogaster
CG10267_SANGER_5_FBgn0037446
Fly_Factor_Survey
Drosophila melanogaster
CG10267_SOLEXA_5_FBgn0037446
Fly_Factor_Survey
Drosophila melanogaster
CG10904_SANGER_5_FBgn0034945
Fly_Factor_Survey
Drosophila melanogaster
CG11071_SANGER_5_FBgn0030532
Fly_Factor_Survey
Drosophila melanogaster
CG11071_SOLEXA_FBgn0030532
Fly_Factor_Survey
Drosophila melanogaster
CG11085
Jaspar
MA0171.1
Drosophila melanogaster
Helix-Turn-Helix
CG11085_Cell_FBgn0030408
Fly_Factor_Survey
Drosophila melanogaster
CG11085_SOLEXA_FBgn0030408
Fly_Factor_Survey
Drosophila melanogaster
CG11294
Jaspar
MA0172.1
Drosophila melanogaster
Helix-Turn-Helix
CG11294_Cell_FBgn0030058
Fly_Factor_Survey
Drosophila melanogaster
CG11294_SOLEXA_FBgn0030058
Fly_Factor_Survey
Drosophila melanogaster
CG11504_SANGER_5_FBgn0039733
Fly_Factor_Survey
Drosophila melanogaster
CG11617
Jaspar
MA0173.1
Drosophila melanogaster
Helix-Turn-Helix
CG11617_Cell_FBgn0031232
Fly_Factor_Survey
Drosophila melanogaster
CG11617_SOLEXA_FBgn0031232
Fly_Factor_Survey
Drosophila melanogaster
CG12029_SANGER_10_FBgn0035454
Fly_Factor_Survey
Drosophila melanogaster
CG12029_SOLEXA_5_FBgn0035454
Fly_Factor_Survey
Drosophila melanogaster
CG12155_SANGER_5_FBgn0029957
Fly_Factor_Survey
Drosophila melanogaster
CG12236_SANGER_10_FBgn0029822
Fly_Factor_Survey
Drosophila melanogaster
CG12236_SOLEXA_5_FBgn0029822
Fly_Factor_Survey
Drosophila melanogaster
CG12236-PB_SANGER_2.5_FBgn0029822
Fly_Factor_Survey
Drosophila melanogaster
CG12236-PB_SOLEXA_FBgn0029822
Fly_Factor_Survey
Drosophila melanogaster
CG12361_Cell_FBgn0250756
Fly_Factor_Survey
Drosophila melanogaster
CG12361_SOLEXA_2_FBgn0250756
Fly_Factor_Survey
Drosophila melanogaster
CG12361_SOLEXA_FBgn0250756
Fly_Factor_Survey
Drosophila melanogaster
CG12605_SANGER_10_FBgn0035481
Fly_Factor_Survey
Drosophila melanogaster
CG12605_SOLEXA_5_FBgn0035481
Fly_Factor_Survey
Drosophila melanogaster
CG12768_SANGER_5_FBgn0037206
Fly_Factor_Survey
Drosophila melanogaster
CG13424
Jaspar
MA0175.1
Drosophila melanogaster
Helix-Turn-Helix
CG13424_Cell_FBgn0034520
Fly_Factor_Survey
Drosophila melanogaster
CG13424_SOLEXA_2_FBgn0034520
Fly_Factor_Survey
Drosophila melanogaster
CG13424_SOLEXA_FBgn0034520
Fly_Factor_Survey
Drosophila melanogaster
CG13897_SANGER_5_FBgn0035160
Fly_Factor_Survey
Drosophila melanogaster
CG14962_SANGER_5_FBgn0035407
Fly_Factor_Survey
Drosophila melanogaster
CG14962_SOLEXA_5_FBgn0035407
Fly_Factor_Survey
Drosophila melanogaster
CG15601_SANGER_5_FBgn0030673
Fly_Factor_Survey
Drosophila melanogaster
CG15696
Jaspar
MA0176.1
Drosophila melanogaster
Helix-Turn-Helix
CG15696_Cell_FBgn0038833
Fly_Factor_Survey
Drosophila melanogaster
CG15696_SOLEXA_FBgn0038833
Fly_Factor_Survey
Drosophila melanogaster
CG1621_SANGER_5_FBgn0033182
Fly_Factor_Survey
Drosophila melanogaster
CG16778_SANGER_5_FBgn0003715
Fly_Factor_Survey
Drosophila melanogaster
CG16899_SANGER_5_FBgn0037735
Fly_Factor_Survey
Drosophila melanogaster
CG17181_SANGER_5_FBgn0035144
Fly_Factor_Survey
Drosophila melanogaster
CG17181_SOLEXA_5_FBgn0035144
Fly_Factor_Survey
Drosophila melanogaster
CG18599
Jaspar
MA0177.1
Drosophila melanogaster
Helix-Turn-Helix
CG18599_Cell_FBgn0038592
Fly_Factor_Survey
Drosophila melanogaster
CG18599_SOLEXA_FBgn0038592
Fly_Factor_Survey
Drosophila melanogaster
CG2052_SANGER_2.5_FBgn0039905
Fly_Factor_Survey
Drosophila melanogaster
CG2052_SOLEXA_2.5_FBgn0039905
Fly_Factor_Survey
Drosophila melanogaster
CG3065_F1-3_SANGER_2.5_FBgn0034946
Fly_Factor_Survey
Drosophila melanogaster
CG3065_F1-3_SOLEXA_2.5_FBgn0034946
Fly_Factor_Survey
Drosophila melanogaster
CG3065_F1-5_SOLEXA_2.5_FBgn0034946
Fly_Factor_Survey
Drosophila melanogaster
CG31670_SANGER_5_FBgn0031375
Fly_Factor_Survey
Drosophila melanogaster
CG31670_SOLEXA_5_FBgn0031375
Fly_Factor_Survey
Drosophila melanogaster
CG31782_F9-11_SANGER_5_FBgn0051782
Fly_Factor_Survey
Drosophila melanogaster
CG31782-F9-11_SOLEXA_FBgn0051782
Fly_Factor_Survey
Drosophila melanogaster
CG32105
Jaspar
MA0178.1
Drosophila melanogaster
Helix-Turn-Helix
CG32105_Cell_FBgn0052105
Fly_Factor_Survey
Drosophila melanogaster
CG32105_SOLEXA_FBgn0052105
Fly_Factor_Survey
Drosophila melanogaster
CG32532
Jaspar
MA0179.1
Drosophila melanogaster
Helix-Turn-Helix
CG32532_Cell_FBgn0052532
Fly_Factor_Survey
Drosophila melanogaster
CG32532_SOLEXA_FBgn0052532
Fly_Factor_Survey
Drosophila melanogaster
CG32830_SANGER_10_FBgn0052830
Fly_Factor_Survey
Drosophila melanogaster
CG32830_SOLEXA_5_FBgn0052830
Fly_Factor_Survey
Drosophila melanogaster
CG33557_da_SANGER_5_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
CG33557_da_SANGER_5_FBgn0053557
Fly_Factor_Survey
Drosophila melanogaster
CG33980_Cell_FBgn0053980
Fly_Factor_Survey
Drosophila melanogaster
CG33980_SOLEXA_2_0_FBgn0053980
Fly_Factor_Survey
Drosophila melanogaster
CG33980_SOLEXA_2_10_FBgn0053980
Fly_Factor_Survey
Drosophila melanogaster
CG33980_SOLEXA_FBgn0053980
Fly_Factor_Survey
Drosophila melanogaster
CG34031
Jaspar
MA0444.1
Drosophila melanogaster
Helix-Turn-Helix
CG34031_Cell_FBgn0054031
Fly_Factor_Survey
Drosophila melanogaster
CG34031_SOLEXA_FBgn0054031
Fly_Factor_Survey
Drosophila melanogaster
CG3407_SANGER_2.5_FBgn0031573
Fly_Factor_Survey
Drosophila melanogaster
CG3407_SOLEXA_2.5_FBgn0031573
Fly_Factor_Survey
Drosophila melanogaster
CG3838_SANGER_5_FBgn0032130
Fly_Factor_Survey
Drosophila melanogaster
CG3919_SANGER_5_FBgn0036423
Fly_Factor_Survey
Drosophila melanogaster
CG4136_Cell_FBgn0029775
Fly_Factor_Survey
Drosophila melanogaster
CG4136_SOLEXA_FBgn0029775
Fly_Factor_Survey
Drosophila melanogaster
CG42234
Jaspar
MA0174.1
Drosophila melanogaster
Helix-Turn-Helix
CG4328
Jaspar
MA0182.1
Drosophila melanogaster
Helix-Turn-Helix
CG4328_Cell_FBgn0036274
Fly_Factor_Survey
Drosophila melanogaster
CG4328_SOLEXA_FBgn0036274
Fly_Factor_Survey
Drosophila melanogaster
CG4360_F1-3_SANGER_2.5_FBgn0038787
Fly_Factor_Survey
Drosophila melanogaster
CG4360-F1-3_SOLEXA_FBgn0038787
Fly_Factor_Survey
Drosophila melanogaster
CG4404_SANGER_5_FBgn0030432
Fly_Factor_Survey
Drosophila melanogaster
CG4854_SANGER_10_FBgn0038766
Fly_Factor_Survey
Drosophila melanogaster
CG4854_SOLEXA_5_FBgn0038766
Fly_Factor_Survey
Drosophila melanogaster
CG5180_SANGER_5_FBgn0043457
Fly_Factor_Survey
Drosophila melanogaster
CG5669_SANGER_10_FBgn0039169
Fly_Factor_Survey
Drosophila melanogaster
CG5669_SOLEXA_5_FBgn0039169
Fly_Factor_Survey
Drosophila melanogaster
CG5953_SANGER_5_FBgn0032587
Fly_Factor_Survey
Drosophila melanogaster
CG6276_SANGER_5_FBgn0038316
Fly_Factor_Survey
Drosophila melanogaster
CG7056
Jaspar
MA0183.1
Drosophila melanogaster
Helix-Turn-Helix
CG7056_Cell_FBgn0038852
Fly_Factor_Survey
Drosophila melanogaster
CG7056_SOLEXA_FBgn0038852
Fly_Factor_Survey
Drosophila melanogaster
CG7368_SANGER_5_FBgn0036179
Fly_Factor_Survey
Drosophila melanogaster
CG7368_SOLEXA_2.5_FBgn0036179
Fly_Factor_Survey
Drosophila melanogaster
CG7745_SANGER_5_FBgn0033616
Fly_Factor_Survey
Drosophila melanogaster
CG7928_SANGER_10_FBgn0039740
Fly_Factor_Survey
Drosophila melanogaster
CG7928_SOLEXA_5_FBgn0039740
Fly_Factor_Survey
Drosophila melanogaster
CG8281_SANGER_5_FBgn0035824
Fly_Factor_Survey
Drosophila melanogaster
CG8319_SANGER_2.5_FBgn0037722
Fly_Factor_Survey
Drosophila melanogaster
CG8319_SOLEXA_2.5_FBgn0037722
Fly_Factor_Survey
Drosophila melanogaster
CG8765_SANGER_5_FBgn0036900
Fly_Factor_Survey
Drosophila melanogaster
CG9437_SANGER_5_FBgn0034599
Fly_Factor_Survey
Drosophila melanogaster
CG9876
Jaspar
MA0184.1
Drosophila melanogaster
Helix-Turn-Helix
CG9876_Cell_FBgn0034821
Fly_Factor_Survey
Drosophila melanogaster
CG9876_SOLEXA_FBgn0034821
Fly_Factor_Survey
Drosophila melanogaster
CG9895_SANGER_10_FBgn0034810
Fly_Factor_Survey
Drosophila melanogaster
CG9895_SOLEXA_5_FBgn0034810
Fly_Factor_Survey
Drosophila melanogaster
Cgd2_3490
UniPROBE
UP00395
Cryptosporidium parvum
putative transcription factor Cryptosporidium parvum; single AP2 domain; orthologous to PF14_0633 in Plasmodium falciparum
AP2
CHA4
Jaspar
MA0283.1
Saccharomyces cerevisiae
Zinc-coordinating
Cha4
UniPROBE
UP00300
Saccharomyces cerevisiae
DNA binding transcriptional activator; mediates serine/threonine activation of the catabolic L-serine (L-threonine) deaminase (CHA1); Zinc-finger protein with Zn[2]-Cys[6] fungal-type binuclear clu...
Zn2Cys6
che-1
Jaspar
MA0260.1
Caenorhabditis elegans
Zinc-coordinating
chinmo_SOLEXA_FBgn0086758
Fly_Factor_Survey
Drosophila melanogaster
CHOP:C/EBPalpha
Transfac
M00249
Xenopus laevis
heterodimers of CHOP and C/EBPalpha
CHX10
Transfac
M00437
Mus musculus
Ci_SANGER_5_FBgn0004859
Fly_Factor_Survey
Drosophila melanogaster
ci_SOLEXA_FBgn0004859
Fly_Factor_Survey
Drosophila melanogaster
cic_SANGER_5_FBgn0028386
Fly_Factor_Survey
Drosophila melanogaster
CIN5
Jaspar
MA0284.1
Saccharomyces cerevisiae
Zipper-Type
Clk_cyc_SANGER_5_FBgn0023076
Fly_Factor_Survey
Drosophila melanogaster
Clk_cyc_SANGER_5_FBgn0023094
Fly_Factor_Survey
Drosophila melanogaster
Clox
Transfac
M00103
Canis familiaris (Canis canis)
Clox
CND-1
UniPROBE
UP00359
Caenorhabditis elegans
C. elegans Neuro D homolog: cnd-1 encodes a basic helix-loop-helix protein that is most closely related to the vertebrate NeuroD transcription factors; during development; CND-1 is predicted to function as a transcriptional regulator whose activity is required for several aspects of motor neuron fate specification; including cell division patterns; proper spatiotemporal expression of fate-specific markers; and normal axonal morphology and pathfinding; CND-1::GFP expression begins in early embryogenesis (<20 cells) in four AB descendants and then continues in mitotically active AB-derived neuronal precursors; unidentified nuclei during gastrulation and enclosure; and postmitotic neurons in the head and ventral cord; at hatching CND-1::GFP expression is visible in ventral cord neurons; but this expression disappears completely by the end of the first larval stage; CND-1::GFP does not appear to be expressed in any non-neuronal ectodermal cells; as its expression does not overlap with that of LIN-26.
bHLH
COE1
Hocomoco
M00037
human, Homo sapiens.
COMP1
Transfac
M00057
Mus musculus
COMP1
COT1
Hocomoco
M00038
human, Homo sapiens.
COT1
Hocomoco
M00039
human, Homo sapiens.
COT2
Hocomoco
M00040
human, Homo sapiens.
COT2
Hocomoco
M00041
human, Homo sapiens.
COUP-TF
Transfac
M00158
Rattus norvegicus
CP2
Transfac
M00072
Mus musculus
CP2
Cphx
UniPROBE
UP00198
Mus musculus
cytoplasmic polyadenylated homeobox
Homeo
Crc_CG6272_SANGER_5_FBgn0000370
Fly_Factor_Survey
Drosophila melanogaster
Crc_CG6272_SANGER_5_FBgn0036126
Fly_Factor_Survey
Drosophila melanogaster
CREB
Transfac
M00039
Mus musculus
cAMP-responsive element binding protein
CREB
Transfac
M00113
Mus musculus
cAMP-responsive element binding protein
CREB
Transfac
M00177
Mus musculus
cAMP-response element-binding protein
CREB
Transfac
M00178
Mus musculus
cAMP-response element binding protein
CREB1
Jaspar
MA0018.2
Rattus norvegicus- Homo sapiens and Mus musculus
Zipper-Type
CREB1
Hocomoco
M00042
human, Homo sapiens.
CREB1.p2
SwissRegulon
Homo sapiens; Mus musculus
cAMP responsive element binding protein 1
CrebA_SANGER_5_FBgn0004396
Fly_Factor_Survey
Drosophila melanogaster
CREM
Hocomoco
M00043
human, Homo sapiens.
Croc
Transfac
M00266
Drosophila melanogaster
Crocodile regulator of head development
crol_F7-16_SANGER_5_FBgn0020309
Fly_Factor_Survey
Drosophila melanogaster
crol-F7-16_SOLEXA_FBgn0020309
Fly_Factor_Survey
Drosophila melanogaster
CRP
Transfac
M00202
CRP binding site
crp_SANGER_10_FBgn0001994
Fly_Factor_Survey
Drosophila melanogaster
Crx
UniPROBE
UP00176
Mus musculus
cone-rod homeobox containing gene
Homeo
CRX
Hocomoco
M00044
human, Homo sapiens.
CRX.p2
SwissRegulon
Homo sapiens; Mus musculus
cone-rod homeobox
CRZ1
Jaspar
MA0285.1
Saccharomyces cerevisiae
Zinc-coordinating
CST6
Jaspar
MA0286.1
Saccharomyces cerevisiae
Zipper-Type
ct
Jaspar
MA0218.1
Drosophila melanogaster
Helix-Turn-Helix
Ct_Cell_FBgn0004198
Fly_Factor_Survey
Drosophila melanogaster
Ct_SOLEXA_FBgn0004198
Fly_Factor_Survey
Drosophila melanogaster
CTCF
Jaspar
MA0139.1
Homo sapiens
Zinc-coordinating
CTCF
Hocomoco
M00045
human, Homo sapiens.
CTCF.p2
SwissRegulon
Homo sapiens; Mus musculus
CCCTC-binding factor (zinc finger protein)
CUP2
Jaspar
MA0287.1
Saccharomyces cerevisiae
Zinc-coordinating
CUP9
Jaspar
MA0288.1
Saccharomyces cerevisiae
Helix-Turn-Helix
Cup9
UniPROBE
UP00308
Saccharomyces cerevisiae
Homeodomain-containing transcriptional repressor of PTR2; which encodes a major peptide transporter; imported peptides activate ubiquitin-dependent proteolysis; resulting in degradation of Cup9p an...
Homeo
Cutl1
UniPROBE
UP00219
Mus musculus
cut-like 1 (Drosophila)
Homeo
CUX1
Hocomoco
M00046
human, Homo sapiens.
CUX2.p2
SwissRegulon
Homo sapiens; Mus musculus
cut-like homeobox 2
cwo_SANGER_5_FBgn0259938
Fly_Factor_Survey
Drosophila melanogaster
CXXC1
Hocomoco
M00047
human, Homo sapiens.
D
Jaspar
MA00445.1
Drosophila melanogaster
Other Alpha-Helix
D_NAR_FBgn0000411
Fly_Factor_Survey
Drosophila melanogaster
D19A_F10-12_SANGER_5_FBgn0022935
Fly_Factor_Survey
Drosophila melanogaster
D19B_F10-12_SANGER_5_FBgn0022699
Fly_Factor_Survey
Drosophila melanogaster
D19B-F10-12_SOLEXA_FBgn0022699
Fly_Factor_Survey
Drosophila melanogaster
da_SANGER_10_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
DAF-16
Transfac
M00475
defective dauer formation 16
DAL80
Jaspar
MA0289.1
Saccharomyces cerevisiae
Zinc-coordinating
DAL81
Jaspar
MA0290.1
Saccharomyces cerevisiae
Zinc-coordinating
DAL82
Jaspar
MA0291.1
Saccharomyces cerevisiae
Other
DBP
Hocomoco
M00048
human, Homo sapiens.
DBP.p2
SwissRegulon
Homo sapiens; Mus musculus
D site of albumin promoter (albumin D-box) binding protein
Dbx1
UniPROBE
UP00255
Mus musculus
developing brain homeobox 1
Homeo
Dbx2
UniPROBE
UP00218
Mus musculus
developing brain homeobox 2
Homeo
DDIT3
Hocomoco
M00049
human, Homo sapiens.
Ddit3::Cebpa
Jaspar
MA0019.1
Rattus norvegicus
Zipper-Type
Deaf1
Jaspar
MA0185.1
Drosophila melanogaster
Other Alpha-Helix
Deaf1_FlyReg_FBgn0013799
Fly_Factor_Survey
Drosophila melanogaster
dei_da_SANGER_5_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
dei_da_SANGER_5_FBgn0008649
Fly_Factor_Survey
Drosophila melanogaster
deltaEF1
Transfac
M00073
Gallus gallus
deltaEF1
Dfd
Jaspar
MA0186.1
Drosophila melanogaster
Helix-Turn-Helix
Dfd
Transfac
M00019
Drosophila melanogaster
Deformed
Dfd_Cell_FBgn0000439
Fly_Factor_Survey
Drosophila melanogaster
Dfd_FlyReg_FBgn0000439
Fly_Factor_Survey
Drosophila melanogaster
Dfd_SOLEXA_FBgn0000439
Fly_Factor_Survey
Drosophila melanogaster
dimm_da_SANGER_5_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
dimm_da_SANGER_5_FBgn0023091
Fly_Factor_Survey
Drosophila melanogaster
Dip3_SANGER_5_FBgn0040465
Fly_Factor_Survey
Drosophila melanogaster
disco_SANGER_5_FBgn0000459
Fly_Factor_Survey
Drosophila melanogaster
disco_SOLEXA_5_FBgn0000459
Fly_Factor_Survey
Drosophila melanogaster
disco-r-Cl1_SANGER_5_FBgn0042650
Fly_Factor_Survey
Drosophila melanogaster
disco-r-F1-2_SOLEXA_FBgn0042650
Fly_Factor_Survey
Drosophila melanogaster
dl
Transfac
M00043
Drosophila melanogaster
dorsal
dl
Transfac
M00120
Drosophila melanogaster
dorsal
dl_1
Jaspar
MA0022.1
Drosophila melanogaster
Ig-fold
dl_2
Jaspar
MA0023.1
Drosophila melanogaster
Ig-fold
dl_FlyReg_FBgn0000462
Fly_Factor_Survey
Drosophila melanogaster
dl_NBT_FBgn0000462
Fly_Factor_Survey
Drosophila melanogaster
Dll
Jaspar
MA0187.1
Drosophila melanogaster
Helix-Turn-Helix
Dll_Cell_FBgn0000157
Fly_Factor_Survey
Drosophila melanogaster
Dll_SOLEXA_FBgn0000157
Fly_Factor_Survey
Drosophila melanogaster
Dlx1
UniPROBE
UP00202
Mus musculus
distal-less homeobox 1
Homeo
Dlx2
UniPROBE
UP00126
Mus musculus
distal-less homeobox 2
Homeo
DLX2
Hocomoco
M00050
human, Homo sapiens.
Dlx3
UniPROBE
UP00154
Mus musculus
distal-less homeobox 3
Homeo
DLX3
Hocomoco
M00051
human, Homo sapiens.
Dlx4
UniPROBE
UP00110
Mus musculus
distal-less homeobox 4
Homeo
Dlx5
UniPROBE
UP00230
Mus musculus
distal-less homeobox 5
Homeo
dm_Max_SANGER_10_FBgn0000472
Fly_Factor_Survey
Drosophila melanogaster
dm_Max_SANGER_10_FBgn0017578
Fly_Factor_Survey
Drosophila melanogaster
DMAP1_NCOR_1-2__SMARC.p2
SwissRegulon
Homo sapiens; Mus musculus
SWI/SNF related; matrix associated; actin dependent regulator of chromatin; subfamily a; member 1;SWI/SNF related; matrix associated; actin dependent regulator of chromatin; subfamily c; member 2;SWI/SNF related; matrix associated; actin dependent regulator of chromatin; subfamily a; member 5;NM_006311;SMRT;SMRTE;TRAC-1;CTG26;TNRC14;
Sterol regulatory element binding protein; regulates transcription of the sterol biosynthetic genes ERG2 and ERG3; member of the fungus-specific Zn[2]-Cys[6] binuclear cluster family of transcription
GA binding protein transcription factor; alpha subunit 60kDa;GA binding protein transcription factor; beta subunit 1;ELK4; ETS-domain protein (SRF accessory protein 1);NM_005229
Elk3
UniPROBE
UP00420
Mus musculus
ELK3; member of ETS oncogene family: ETS domain-containing protein Elk-3
ETS
ELK3
Hocomoco
M00070
human, Homo sapiens.
ELK4
Jaspar
MA0076.1
Homo sapiens
Winged Helix-Turn-Helix
Elk4
UniPROBE
UP00415
Mus musculus
ELK4; member of ETS oncogene family: ETS domain-containing protein Elk-4
ETS
ELK4
Hocomoco
M00071
human, Homo sapiens.
EmBP-1
Jaspar
MA0128.1
Triticum aestivum
Zipper-Type
ems
Jaspar
MA0219.1
Drosophila melanogaster
Helix-Turn-Helix
Ems_Cell_FBgn0000576
Fly_Factor_Survey
Drosophila melanogaster
ems_FlyReg_FBgn0000576
Fly_Factor_Survey
Drosophila melanogaster
Ems_SOLEXA_FBgn0000576
Fly_Factor_Survey
Drosophila melanogaster
Emx2
UniPROBE
UP00201
Mus musculus
empty spiracles homolog 2 (Drosophila)
Homeo
en
Jaspar
MA0220.1
Drosophila melanogaster
Helix-Turn-Helix
En_Cell_FBgn0000577
Fly_Factor_Survey
Drosophila melanogaster
en_FlyReg_FBgn0000577
Fly_Factor_Survey
Drosophila melanogaster
en_SOLEXA_2_FBgn0000577
Fly_Factor_Survey
Drosophila melanogaster
En_SOLEXA_FBgn0000577
Fly_Factor_Survey
Drosophila melanogaster
En-1
Transfac
M00396
Mus musculus
engrailed 1
En1
Jaspar
MA0027.1
Mus musculus
Helix-Turn-Helix
En1
UniPROBE
UP00167
Mus musculus
engrailed 1
Homeo
EN1-2.p2
SwissRegulon
Homo sapiens; Mus musculus
engrailed homeobox 1;engrailed homeobox 2
En2
UniPROBE
UP00163
Mus musculus
engrailed 2
Homeo
ENOA
Hocomoco
M00072
human, Homo sapiens.
Eomes
UniPROBE
UP00068
Mus musculus
Eomesodermin homolog (Xenopus laevis): Mus musculus similar to Eomesodermin homolog (LOC235673); mRNA
GA repeat binding protein; alpha: Mus musculus GA repeat binding protein; alpha
ETS
GABPA
Hocomoco
M00116
human, Homo sapiens.
GAL4
Jaspar
MA0299.1
Saccharomyces cerevisiae
Zinc-coordinating
GAL4
Transfac
M00049
Saccharomyces cerevisiae
GAL4
GAL4
Transfac
M00198
Saccharomyces cerevisiae
GAL4
Gal4
UniPROBE
UP00322
Saccharomyces cerevisiae
DNA-binding transcription factor required for the activation of the GAL genes in response to galactose
Zn2Cys6
Gamyb
Jaspar
MA0034.1
Hordeum vulgare
Helix-Turn-Helix
GAMYB
Transfac
M00345
Hordeum vulgare
GA-regulated myb gene from barley
GAT1
Jaspar
MA0300.1
Saccharomyces cerevisiae
Zinc-coordinating
Gat1
UniPROBE
UP00287
Saccharomyces cerevisiae
Transcriptional activator of genes involved in nitrogen catabolite repression; member of the GATA family of DNA binding proteins; activity and localization regulated by nitrogen limitation and Ure2p
GATA
GAT3
Jaspar
MA0301.1
Saccharomyces cerevisiae
Zinc-coordinating
Gat3
UniPROBE
UP00319
Saccharomyces cerevisiae
Protein containing GATA family zinc finger motifs
GATA
GAT4
Jaspar
MA0302.1
Saccharomyces cerevisiae
Zinc-coordinating
Gat4
UniPROBE
UP00336
Saccharomyces cerevisiae
Protein containing GATA family zinc finger motifs
GATA
GATA-1
Transfac
M00075
Mus musculus
GATA-binding factor 1
GATA-1
Transfac
M00126
Mus musculus
GATA-binding factor 1
GATA-1
Transfac
M00127
Mus musculus
GATA-binding factor 1
GATA-1
Transfac
M00128
Mus musculus
GATA-binding factor 1
GATA-1
Transfac
M00346
Mus musculus
GATA-binding factor 1
GATA-1
Transfac
M00347
Gallus gallus
GATA-binding factor 1
GATA-2
Transfac
M00076
Homo sapiens
GATA-binding factor 2
GATA-2
Transfac
M00348
Gallus gallus
GATA-binding factor 2
GATA-2
Transfac
M00349
Gallus gallus
GATA-binding factor 2
GATA-3
Transfac
M00077
Homo sapiens
GATA-binding factor 3
GATA-3
Transfac
M00350
Gallus gallus
GATA-binding factor 3
GATA-3
Transfac
M00351
Gallus gallus
GATA-binding factor 3
GATA-6
Transfac
M00462
Gallus gallus
GATA-X
Transfac
M00203
Mus musculus
GATA binding site
Gata1
Jaspar
MA0035.2
Mus musculus
Zinc-coordinating
GATA1
Hocomoco
M00117
human, Homo sapiens.
GATA1..3.p2
SwissRegulon
Homo sapiens; Mus musculus
GATA binding protein 1 (globin transcription factor 1);GATA binding protein 2;GATA binding protein 3
GATA2
Jaspar
MA0036.1
Homo sapiens
Zinc-coordinating
GATA2
Hocomoco
M00118
human, Homo sapiens.
GATA3
Jaspar
MA0037.1
Homo sapiens
Zinc-coordinating
Gata3
UniPROBE
UP00032
Mus musculus
GATA binding protein 3: Mus musculus GATA binding protein 3 (Gata3); mRNA.
GATA
GATA3
Hocomoco
M00119
human, Homo sapiens.
GATA4
Hocomoco
M00120
human, Homo sapiens.
Gata5
UniPROBE
UP00080
Mus musculus
GATA binding protein 5
GATA
GATA5
Hocomoco
M00121
human, Homo sapiens.
Gata6
UniPROBE
UP00100
Mus musculus
GATA binding protein 6
GATA
GATA6
Hocomoco
M00122
human, Homo sapiens.
GATA6.p2
SwissRegulon
Homo sapiens; Mus musculus
GATA binding protein 6
GATAd_SANGER_5_FBgn0032223
Fly_Factor_Survey
Drosophila melanogaster
GATAe_SANGER_5_FBgn0038391
Fly_Factor_Survey
Drosophila melanogaster
GBP
Transfac
M00182
G-box binding proteins
Gbx1
UniPROBE
UP00204
Mus musculus
gastrulation brain homeobox 1
Homeo
Gbx2
UniPROBE
UP00131
Mus musculus
gastrulation brain homeobox 2
Homeo
GC
Transfac
M00255
GC box elements
gce_Clk_SANGER_5_FBgn0023076
Fly_Factor_Survey
Drosophila melanogaster
gce_Clk_SANGER_5_FBgn0030627
Fly_Factor_Survey
Drosophila melanogaster
GCM
Transfac
M00270
Drosophila melanogaster
glial cells missing
Gcm1
UniPROBE
UP00070
Mus musculus
glial cells missing homolog 1 (Drosophila)
GCM
GCM1
Hocomoco
M00123
human, Homo sapiens.
GCN4
Jaspar
MA0303.1
Saccharomyces cerevisiae
Zipper-Type
GCN4
Transfac
M00038
Saccharomyces cerevisiae
GCN4
GCN4
Transfac
M00204
Saccharomyces cerevisiae
GCN4
Gcn4
UniPROBE
UP00285
Saccharomyces cerevisiae
Transcriptional activator of amino acid biosynthetic genes in response to amino acid starvation
glioma-associated oncogene homolog 1 (zinc finger protein);GLI-Kruppel family member GLI2;GLI-Kruppel family member GLI3
GLI2
Hocomoco
M00129
human, Homo sapiens.
GLI3
Hocomoco
M00130
human, Homo sapiens.
Glis2
UniPROBE
UP00024
Mus musculus
GLIS family zinc finger 2: GLIS family zinc finger 2 (Glis2); mRNA
zf-C2H2
GLIS3
Hocomoco
M00131
human, Homo sapiens.
GLN3
Jaspar
MA0307.1
Saccharomyces cerevisiae
Zinc-coordinating
Gln3
UniPROBE
UP00318
Saccharomyces cerevisiae
Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR); localization and activity regulated by quality of nitrogen source
GATA
Gm397
UniPROBE
UP00042
Mus musculus
gene model 397; (NCBI): Mus musculus similar to Zinc finger protein 58 (Zfp-58) (Zinc finger protein Mfg-1) (LOC212386); mRNA
glucocorticoid modulatory element binding protein 1: transcription termination factor 1; mRNA (cDNA clone MGC:69635 IMAGE:6847867); complete cds
SAND
GR
Transfac
M00192
Mus musculus
glucocorticoid receptor
GR
Transfac
M00205
Mus musculus
Glucocorticoid response element
grh_FlyReg_FBgn0259211
Fly_Factor_Survey
Drosophila melanogaster
gsb_SOLEXA_5_FBgn0001148
Fly_Factor_Survey
Drosophila melanogaster
gsb-n_SOLEXA_5_FBgn0001147
Fly_Factor_Survey
Drosophila melanogaster
Gsc
Jaspar
MA0190.1
Drosophila melanogaster
Helix-Turn-Helix
Gsc
UniPROBE
UP00112
Mus musculus
goosecoid
Homeo
Gsc_Cell_FBgn0010323
Fly_Factor_Survey
Drosophila melanogaster
Gsc_SOLEXA_FBgn0010323
Fly_Factor_Survey
Drosophila melanogaster
Gsh2
UniPROBE
UP00127
Mus musculus
genomic screened homeo box 2
Homeo
GSM1
Jaspar
MA0308.1
Saccharomyces cerevisiae
Zinc-coordinating
Gsm1
UniPROBE
UP00301
Saccharomyces cerevisiae
Putative zinc cluster protein of unknown function; computationally predicted involvement in oxidative phosphorylation; based on patterns of expression and sequence analysis
Helix Loop Helix Protein 1: hlh-1 encodes a basic helix-loop-helix (bHLH) transcription factor that is the C. elegans ortholog of the myogenic regulatory factor (MRF) subgroup of bHLH proteins; in C. elegans; HLH-1 activity is required during embryogenesis for proper bodywall muscle development and function; but not for bodywall muscle cell fate specification; per se: hlh-1 null mutants generate the normal number of bodywall muscle cells; but the arrangement of these cells is disrupted and mutant animals exhibit weak and disorganized muscle contractions; however; ectopic expression of HLH-1 in the embryo is sufficient to convert nearly all embryonic cell types to a bodywall muscle-like fate; in regulating bodywall myogenesis; genetic studies indicate that HLH-1 acts together with the UNC-120/SRF and HND-1/HAND transcription factors; both of which can also induce muscle-like fates when overexpressed in embryos; in addition; in some cell lineages; hlh-1 likely lies downstream of the PAL-1 homeodomain protein required for specification of the C and D founder cell fates; HLH-1 is expressed in nuclei and first appears in bodywall muscle precursors beginning at the ~80-cell stage of embryogenesis; expression then continues in these cells and their differentiated descendants throughout embryonic; larval; and adult stages of development.
bHLH
HLH-10
UniPROBE
UP00358
Caenorhabditis elegans
Helix Loop Helix Protein 10: none available
bHLH
HLH-11
UniPROBE
UP00357
Caenorhabditis elegans
Helix Loop Helix Protein 11: none available
bHLH
HLH-14
UniPROBE
UP00363
Caenorhabditis elegans
Helix Loop Helix Protein 14: hlh-14 encodes a basic helix-loop-helix (bHLH) transcription factor that is one of five C. elegans Achaete-Scute family homologs; HLH-14 activity is required generally for normal egg-laying; movement; body morphology; and larval development; more specifically; HLH-14 is required for proper neuronal development; particularly for regulation of the asymmetric cell division that gives rise to the PVQ/HSN/PHB neuroblasts and for normal differentiation of these neuroblast descendants; including their cell division patterns; migrations; and neurotransmitter expression; in specifying neuronal cell fates; genetic evidence suggests that hlh-14 acts together with hlh-2; which encodes the C. elegans E/Daughterless ortholog; HLH-14 is expresed exclusively in the embryo and detected in the left and right PVQ/HSN/PHB neuroblasts and their descendants; as well as in other cells identified; tentatively; as anterior neuroblasts and posterior neuroblasts such as Caapa.
bHLH
HLH-15
UniPROBE
UP00361
Caenorhabditis elegans
Helix Loop Helix Protein 15 : none available
bHLH
HLH-19
UniPROBE
UP00378
Caenorhabditis elegans
Helix Loop Helix Protein 19 : none available
bHLH
HLH-2
UniPROBE
UP00384
Caenorhabditis elegans
Helix Loop Helix Protein 2: hlh-2 encodes a Class I basic helix-loop-helix (bHLH) transcription factor that is the C. elegans ortholog of the mammalian E and Drosophila Daughterless transcriptional activators; HLH-2 activity is required for cell fate specifications occuring during embryonic and larval development that affect such processes as gonadogenesis; male tail formation; and programmed cell death; HLH-2 has been shown to dimerize with at least two C. elegans Acheate-scute homologs; LIN-32; a neural-specific protein with which it functions in male tail development and HLH-3; with which it is coexpressed in the nuclei of embryonic neuronal prescursors and with which it regulates the transcription of the EGL-1 cell death activator in the NSM sister cells; in gonadogenesis; HLH-2 is required for bestowing proAC competence on the cells that undergo the AC/VU (anchor cell/ventral uterine precursor) cell fate decision; for specification; differentiation; and function of the distal tip cell (DTC) and AC; including transcriptional regulation of the LAG-2 Delta-like ligand in the latter; and for formation of the uterine seam cell (utse); genetic analysis also suggests that HLH-2 functions with HLH-14; an additional Acaete-scute homolog; to specify the PVQ/HSN/PHB neuroblast cell lineage; HLH-2 is expressed in all nuclei of early embryos until the ~200-cell stage; when expression becomes increasingly restricted to neuronal cells and their immediate precursors; later expression is detected in; but not limited to; pharyngeal cells; anterior neurons; vulval and uterine muscles; the DTCs; the presumptive and mature AC; the Q neuroblast; and enteric muscles; comparative analysis of transcriptional and translational reporters indicates that hlh-2 is expressed in both the anchor cell and the ventral uterine (VU) precursor; but that expression in the latter is subject to post-transcriptional down-regulation; HLH-2 accumulation in the presumptive AC is the first detectable difference between the AC and VU precursors during the lateral specification event that distinguishes these two cell fates.
bHLH
HLH-25
UniPROBE
UP00386
Caenorhabditis elegans
Helix Loop Helix Protein 25: hlh-25 encodes a REF-1-like protein with two bHLH domains that partially represses lag-2 transcription in ABa descendants (in response to a Notch signal; redundantly with HLH-27); lag-2 repression by HLH-25 may require UNC-37; HLH-25's paralogs include HLH-26 through HLH-29 and (more distantly) REF-1; hlh-25 is transcribed in the early MS lineage; has clustered binding sites for MED-1/2 in its promoter region; can be activated by ectopic MED-1; and loses activity in MED-1/2-deficient genetic backgrounds; HLH-25 is expressed in ABp granddaughters ~25 minutes after ABp first contacts an APX-1-expressing cell; and in ABa descendants after a second Notch interaction; HLH-25 is also expressed in four EMS granddaughters (MSaa; MSap; MSpa; MSpp) beginning at the 24-cell stage; ectopic HLH-25 can induce body muscle development in skn-1(RNAi);pal-1(RNAi) embryos that would otherwise lack muscle; HLH-25 is required for embryonic viability in mass RNAi assays.
bHLH
HLH-26
UniPROBE
UP00370
Caenorhabditis elegans
Helix Loop Helix Protein 26: hlh-26 encodes a REF-1-like protein with two bHLH domains that represses lag-2 transcription in ABa descendants (in response to a Notch signal; redundantly with REF-1; HLH-27; HLH-29; and perhaps HLH-28) and tbx-37 transcription in EMS descendants (independently of Notch; redundantly with REF-1; HLH-27; HLH-29; and perhaps HLH-28); lag-2 repression by HLH-26 may require UNC-37; HLH-26's paralogs include HLH-25 through HLH-29 and (more distantly) REF-1; HLH-26 is not visibly expressed in EMS descendants; and has no obvious function in mass RNAi assays.
bHLH
HLH-27
UniPROBE
UP00364
Caenorhabditis elegans
Helix Loop Helix Protein 27: hlh-27 encodes a REF-1-like protein with two bHLH domains; that represses lag-2 transcription in ABa descendants (in response to a Notch signal; redundantly with REF-1; HLH-25; HLH-26; HLH-29; and perhaps HLH-28) and tbx-37 transcription in EMS descendants (independently of Notch; redundantly with REF-1; HLH-26; HLH-29; and perhaps HLH-28); lag-2 repression by HLH-27 may require UNC-37; HLH-27's paralogs include HLH-25 through HLH-29 and (more distantly) REF-1; hlh-27 is transcribed in the early MS lineage; probably due to MED-1/2 binding of clustered sites in the hlh-27 promoter region; HLH-27 is expressed in ABp granddaughters ~25 minutes after ABp first contacts an APX-1-expressing cell; and in ABa descendants after a second Notch interaction; HLH-27 is also expressed in four EMS granddaughters (MSaa; MSap; MSpa; MSpp) beginning at the 24-cell stage; in a SKN-1-dependent manner; HLH-27 is required for embryonic viability in mass RNAi assays.
bHLH
HLH-29
UniPROBE
UP00368
Caenorhabditis elegans
Helix Loop Helix Protein 29: hlh-29 encodes a REF-1-like protein with two bHLH domains that represses lag-2 transcription in ABa descendants (in response to a Notch signal; redundantly with REF-1; HLH-26; and HLH-27) and tbx-37 transcription in EMS descendants (independently of Notch; redundantly with REF-1; HLH-26; HLH-27; and perhaps HLH-28); HLH-29 is identical to residues 24-262 of HLH-28; shares near-identical promoter regions in a inverted duplex; and is likely to be highly redundant with HLH-28; HLH-29 (with HLH-28) is also required for late embryonic viability; and for normal fat metabolism; yolk protein transport; gonadal and vulval development; bordering behavior; and chemosensory responses; and repression of tax-4 and osm-9 transcription; lag-2 repression by HLH-29 may require UNC-37; HLH-29's paralogs include HLH-25 through HLH-28 and (more distantly) REF-1; hlh-29 is transcribed in the early MS and E lineages; probably due to MED-1/2 binding of clustered sites in the hlh-28/hlh-29 shared promoter region; HLH-29 is expressed in ABp granddaughters ~25 minutes after ABp first contacts an APX-1-expressing cell; and in ABa descendants after a second Notch interaction; HLH-29 is also expressed in all EMS granddaughters beginning at the 24-cell stage; in a SKN-1-dependent manner; furthermore; HLH-29 is expressed in amphid and phasmid neurons; ALA and PVT neurons; chemosensory and mechanosensory neurons; ASI; ASK; PHA; PQR; and neurons of the anterior pharynx; as well as in vulva; somatic gonad; rectal glands; intestine; and larval pharyngeal muscle PM1; ventral posterior coelomocytes; spermatheca; and vulval muscles; hlh-28/29 mRNA is present throughout development; but varies roughly 30-fold in quantity; with 3.5-fold more mRNA in L1 larvae than in adults; ectopic HLH-29 can rescue the intestinal defect of ref-1(RNAi) embryos; hlh-28/29 transcription is inhibited by LIN-12 and MED-1.
bHLH
HLH-3
UniPROBE
UP00379
Caenorhabditis elegans
Helix Loop Helix Protein 3: hlh-3 encodes a basic helix-loop-helix transcription factor homologous to Drosophila Achaete-scute; in vitro; HLH-3 can heterodimerize; and bind an E-box-containing probe; with HLH-2; the C. elegans E/daughterless ortholog with which it is coexpressed in the nuclei of embryonic neuronal precursors.
bHLH
HLH-30
UniPROBE
UP00365
Caenorhabditis elegans
Helix Loop Helix Protein 30: W02C12.3 is orthologous to the human gene TRANSCRIPTION FACTOR BINDING TO IGHM ENHANCER 3 (TFE3; OMIM:314310); which when mutated leads to disease.
bHLH
HLH-4
UniPROBE
UP00369
Caenorhabditis elegans
Helix Loop Helix Protein 4: none available
bHLH
HLH-8
UniPROBE
UP00371
Caenorhabditis elegans
Helix Loop Helix Protein 8: The hlh-8 gene encodes a helix-loop-helix protein required for normal muscle development; and hence for normal defecation and egg-laying.
bHLH
HLH106_SANGER_10_FBgn0015234
Fly_Factor_Survey
Drosophila melanogaster
HLH106_SANGER_5_1_FBgn0015234
Fly_Factor_Survey
Drosophila melanogaster
HLH106_SANGER_5_2_FBgn0015234
Fly_Factor_Survey
Drosophila melanogaster
HLH106_SANGER_5_3_FBgn0015234
Fly_Factor_Survey
Drosophila melanogaster
HLH4C_da_SANGER_5_3_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
HLH4C_da_SANGER_5_3_FBgn0011277
Fly_Factor_Survey
Drosophila melanogaster
HLH4C_da_SANGER_5_4_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
HLH4C_da_SANGER_5_4_FBgn0011277
Fly_Factor_Survey
Drosophila melanogaster
HLH4C_da_SANGER_5_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
HLH4C_da_SANGER_5_FBgn0011277
Fly_Factor_Survey
Drosophila melanogaster
HLH4C_SANGER_5_FBgn0011277
Fly_Factor_Survey
Drosophila melanogaster
HLH54F_da_SANGER_5_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
HLH54F_da_SANGER_5_FBgn0022740
Fly_Factor_Survey
Drosophila melanogaster
HLHm3_SANGER_5_FBgn0002609
Fly_Factor_Survey
Drosophila melanogaster
HLHm5_FlyReg_FBgn0002631
Fly_Factor_Survey
Drosophila melanogaster
HLHm5_SANGER_5_FBgn0002631
Fly_Factor_Survey
Drosophila melanogaster
HLHm7_SANGER_5_FBgn0002633
Fly_Factor_Survey
Drosophila melanogaster
HLHmbeta_SANGER_10_FBgn0002733
Fly_Factor_Survey
Drosophila melanogaster
HLHmdelta_SANGER_10_FBgn0002734
Fly_Factor_Survey
Drosophila melanogaster
HLHmgamma_SANGER_10_FBgn0002735
Fly_Factor_Survey
Drosophila melanogaster
HLHmgamma_SANGER_5_2_FBgn0002735
Fly_Factor_Survey
Drosophila melanogaster
Hltf
Jaspar
MA0109.1
Oryctolagus cuniculus
Zinc-coordinating
HLTF
Hocomoco
M00142
human, Homo sapiens.
Hlx1
UniPROBE
UP00225
Mus musculus
H2.0-like homeo box 1 (Drosophila)
Homeo
Hlxb9
UniPROBE
UP00123
Mus musculus
homeobox gene HB9
Homeo
Hmbox1
UniPROBE
UP00161
Mus musculus
homeobox containing 1
Homeo
HMG-1
Jaspar
MA0044.1
Pisum sativum
Other Alpha-Helix
HMG-I/Y
Jaspar
MA0045.1
Pisum sativum
Other Alpha-Helix
HMGA1
Hocomoco
M00143
human, Homo sapiens.
HMGA1-2.p2
SwissRegulon
Homo sapiens; Mus musculus
high mobility group AT-hook 1;high mobility group AT-hook 2
Zinc-finger transcription factor that regulates genes involved in branched chain amino acid biosynthesis and ammonia assimilation; positively regulated by alpha-isopropylmalate; an intermediate in ...
Zn2Cys6
Lhx1
UniPROBE
UP00262
Mus musculus
LIM homeobox protein 1
Homeo
Lhx2
UniPROBE
UP00115
Mus musculus
LIM homeobox protein 2
Homeo
LHX2
Hocomoco
M00192
human, Homo sapiens.
Lhx3
Jaspar
MA0135.1
Mus musculus
Helix-Turn-Helix
Lhx3
Transfac
M00510
Mus musculus
LIM homeobox transcription factor 3
Lhx3
UniPROBE
UP00130
Mus musculus
LIM homeobox protein 3
Homeo
LHX3
Hocomoco
M00193
human, Homo sapiens.
LHX3-4.p2
SwissRegulon
Homo sapiens; Mus musculus
LIM homeobox 3;LIM homeobox 4
Lhx4
UniPROBE
UP00261
Mus musculus
LIM homeobox protein 4
Homeo
Lhx5
UniPROBE
UP00212
Mus musculus
LIM homeobox protein 5
Homeo
Lhx6
UniPROBE
UP00256
Mus musculus
LIM homeobox protein 6
Homeo
Lhx8
UniPROBE
UP00184
Mus musculus
LIM homeobox protein 8
Homeo
Lhx9
UniPROBE
UP00175
Mus musculus
LIM homeobox protein 9
Homeo
lim_SOLEXA_2_FBgn0026411
Fly_Factor_Survey
Drosophila melanogaster
Lim1
Jaspar
MA0194.1
Drosophila melanogaster
Helix-Turn-Helix
LIM1
Transfac
M00506
Nicotiana tabacum
Lim1_Cell_FBgn0026411
Fly_Factor_Survey
Drosophila melanogaster
Lim1_SOLEXA_FBgn0026411
Fly_Factor_Survey
Drosophila melanogaster
Lim3
Jaspar
MA0195.1
Drosophila melanogaster
Helix-Turn-Helix
Lim3_Cell_FBgn0002023
Fly_Factor_Survey
Drosophila melanogaster
Lim3_SOLEXA_FBgn0002023
Fly_Factor_Survey
Drosophila melanogaster
lin-14
Jaspar
MA0261.1
Caenorhabditis elegans
Other
LIN-32
UniPROBE
UP00381
Caenorhabditis elegans
abnormal cell LINeage: lin-32 encodes a basic helix-loop-helix transcription factor that is required for development of several types of neurons; including the touch receptor neurons and the male sensory ray neurons.
bHLH
lista
Fly_Factor_Survey
Drosophila melanogaster
lmd_SANGER_5_FBgn0039039
Fly_Factor_Survey
Drosophila melanogaster
lmd_SOLEXA_5_FBgn0039039
Fly_Factor_Survey
Drosophila melanogaster
Lmo2
Transfac
M00277
Mus musculus
complex of Lmo2 bound to Tal-1 E2A proteins and GATA-1 half-site 1
Lmo2
Transfac
M00278
Mus musculus
complex of Lmo2 bound to Tal-1 E2A proteins and GATA-1 half-site 2
LMO2.p2
SwissRegulon
Homo sapiens; Mus musculus
LIM domain only 2 (rhombotin-like 1)
Lmx1a
UniPROBE
UP00188
Mus musculus
LIM homeobox transcription factor 1 alpha
Homeo
Lmx1b
UniPROBE
UP00169
Mus musculus
LIM homeobox transcription factor 1 beta
Homeo
lola_PK_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola_SOLEXA_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PA_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PA_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PC_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PC_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PD_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PD_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PF_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PF_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PG_SANGER_2.5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PG_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PJ_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PJ_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PK_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PL_SANGER_2.5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PL_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PO_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PO_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PQ_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PQ_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PT_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PT_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PU_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PU_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PW_SANGER_5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PW_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PY_SANGER_2.5_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
lola-PY_SOLEXA_FBgn0005630
Fly_Factor_Survey
Drosophila melanogaster
LUN-1
Transfac
M00480
Homo sapiens
luna_SANGER_5_FBgn0040765
Fly_Factor_Survey
Drosophila melanogaster
luna_SOLEXA_5_FBgn0040765
Fly_Factor_Survey
Drosophila melanogaster
Lyf-1
Transfac
M00141
Mus musculus
LyF-1
LYS14
Jaspar
MA0325.1
Saccharomyces cerevisiae
Zinc-coordinating
Lys14
UniPROBE
UP00282
Saccharomyces cerevisiae
Transcriptional activator involved in regulation of genes of the lysine biosynthesis pathway
Zn2Cys6
mab-3
Jaspar
MA0262.1
Caenorhabditis elegans
Zinc-coordinating
MAC1
Jaspar
MA0326.1
Saccharomyces cerevisiae
Zinc-coordinating
Macho-1
Jaspar
MA0118.1
Halocynthia roretzi
Zinc-coordinating
Mad_FlyReg_FBgn0011648
Fly_Factor_Survey
Drosophila melanogaster
MAF
Hocomoco
M00198
human, Homo sapiens.
MAFA
Hocomoco
M00194
human, Homo sapiens.
Mafb
Jaspar
MA0117.1
Rattus norvegicus
Zipper-Type
Mafb
UniPROBE
UP00045
Mus musculus
v-maf musculoaponeurotic fibrosarcoma oncogene family; protein B (avian): Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family; protein B (avian) (Mafb); mRNA
BRLZ
MAFB
Hocomoco
M00195
human, Homo sapiens.
MAFB.p2
SwissRegulon
Homo sapiens; Mus musculus
v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
MAFG
Hocomoco
M00196
human, Homo sapiens.
Mafk
UniPROBE
UP00044
Mus musculus
v-maf musculoaponeurotic fibrosarcoma oncogene family; protein K (avian)
BRLZ
MAFK
Hocomoco
M00197
human, Homo sapiens.
Mat1-Mc
Transfac
M00275
Schizosaccharomyces pombe
TR-boxes of M cell-specific genes interacting with Mat1-Mc
Mat1-Mc
Transfac
M00276
Schizosaccharomyces pombe
M-box interacting with Mat1-Mc
MATA1
Jaspar
MA0327.1
Saccharomyces cerevisiae
Helix-Turn-Helix
MATa1
Transfac
M00030
Saccharomyces cerevisiae
mating factor a1
MATALPHA2
Jaspar
MA0328.1
Saccharomyces cerevisiae
Helix-Turn-Helix
MATalpha2
Transfac
M00031
Saccharomyces cerevisiae
mating factor alpha2
Matalpha2
UniPROBE
UP00307
Saccharomyces cerevisiae
Homeobox-domain protein that; with Mcm1p; represses a-specific genes in haploids; acts with A1p to repress transcription of haploid-specific genes in diploids; one of two genes encoded by the MATal...
Homeo
MAX
Jaspar
MA0058.1
Homo sapiens
Zipper-Type
Max
Transfac
M00119
Homo sapiens
Max
Max
UniPROBE
UP00060
Mus musculus
Max protein
HLH
MAX
Hocomoco
M00199
human, Homo sapiens.
Max_Mnt_SANGER_5_FBgn0017578
Fly_Factor_Survey
Drosophila melanogaster
Max_Mnt_SANGER_5_FBgn0023215
Fly_Factor_Survey
Drosophila melanogaster
MAZ
Hocomoco
M00200
human, Homo sapiens.
MAZ.p2
SwissRegulon
Homo sapiens; Mus musculus
MYC-associated zinc finger protein (purine-binding transcription factor)
MAZR
Transfac
M00491
Mus musculus
MAZ related factor
MBD2
Hocomoco
M00201
human, Homo sapiens.
MBP1
Jaspar
MA0329.1
Saccharomyces cerevisiae
Ig-fold
Mbp1
UniPROBE
UP00271
Saccharomyces cerevisiae
Transcription factor involved in regulation of cell cycle progression from G1 to S phase; forms a complex with Swi6p that binds to MluI cell cycle box regulatory element in promoters of DNA synthesis
HTH APSES-type
MBP1::SWI6
Jaspar
MA0330.1
Saccharomyces cerevisiae
Ig-fold
MCM1
Jaspar
MA0331.1
Saccharomyces cerevisiae
Other Alpha-Helix
MCM1
Transfac
M00125
Saccharomyces cerevisiae
yeast factor MCM1 cooperating with MATalpha factors
Mcm1
UniPROBE
UP00326
Saccharomyces cerevisiae
Transcription factor involved in cell-type-specific transcription and pheromone response
MADS
MCR
Hocomoco
M00202
human, Homo sapiens.
MDL-1
UniPROBE
UP00382
Caenorhabditis elegans
MAD-Like: mdl-1 encodes a basic helix-loop-helix (bHLH) protein similar to the vertebrate MAD transcriptional regulators; in vitro; MDL-1 can heterodimerize; and bind an E-box DNA sequence; with MXL-1; a C. elegans MAX-like bHLH protein; when expressed in rat embryonic fibroblasts; MDL-1 is able to suppress c-MYC/RAS-induced cell transformation; in a manner dependent upon an intact; predicted SIN3 interaction domain; mdl-1::gfp promoter fusions are expressed in a number of different tissues; including the posterior intestine; anterior and ventral cord neurons; pharyngeal and body wall muscles; somatic gonad precursors; and hypodermal cells; yeast one-hybrid and ChIP experiments indicate that DAF-3/Smad can bind the mdl-1 promoter; in addition; mdl-1 pharyngeal expression is specifically increased in daf-3(RNAi) animals; suggesting that DAF-3 directly negatively regulates mdl-1 transcription in pharyngeal tissue during dauer formation.
Meis-1 (myeloid ecotropic viral integration site 1)
Meis1
UniPROBE
UP00186
Mus musculus
myeloid ecotropic viral integration site 1
Homeo
MEIS1
Hocomoco
M00207
human, Homo sapiens.
MEIS1A:HOXA9
Transfac
M00420
Mus musculus
Meis-1a:HOXA9 heterodimeric binding
MEIS1B:HOXA9
Transfac
M00421
Mus musculus
Meis-1b:HOXA9 heterodimeric binding
MEIS2
Hocomoco
M00208
human, Homo sapiens.
Meox1
UniPROBE
UP00233
Mus musculus
mesenchyme homeobox 1
Homeo
Mes2_SANGER_5_FBgn0037207
Fly_Factor_Survey
Drosophila melanogaster
Met_Clk_SANGER_5_FBgn0002723
Fly_Factor_Survey
Drosophila melanogaster
Met_Clk_SANGER_5_FBgn0023076
Fly_Factor_Survey
Drosophila melanogaster
Met_SANGER_5_FBgn0002723
Fly_Factor_Survey
Drosophila melanogaster
MET28
Jaspar
MA0332.1
Saccharomyces cerevisiae
Zipper-Type
MET31
Jaspar
MA0333.1
Saccharomyces cerevisiae
Zinc-coordinating
MET32
Jaspar
MA0334.1
Saccharomyces cerevisiae
Zinc-coordinating
Met32
UniPROBE
UP00345
Saccharomyces cerevisiae
Zinc-finger DNA-binding protein; involved in regulating expression of the methionine biosynthetic genes; similar to Met31p
zf-C2H2
MET4
Jaspar
MA0335.1
Saccharomyces cerevisiae
Zipper-Type
MGA1
Jaspar
MA0336.1
Saccharomyces cerevisiae
Winged Helix-Turn-Helix
Mga1
UniPROBE
UP00339
Saccharomyces cerevisiae
Protein similar to heat shock transcription factor
HSF_DNA-bind
MIF-1
Transfac
M00279
Homo sapiens and Rattus norvegicus
MIBP-1 / RFX1 complex
MIG1
Jaspar
MA0337.1
Saccharomyces cerevisiae
Zinc-coordinating
MIG1
Transfac
M00061
Saccharomyces cerevisiae
MIG1
Mig1
UniPROBE
UP00291
Saccharomyces cerevisiae
Transcription factor involved in glucose repression
zf-C2H2
MIG2
Jaspar
MA0338.1
Saccharomyces cerevisiae
Zinc-coordinating
Mig2
UniPROBE
UP00349
Saccharomyces cerevisiae
Protein containing zinc fingers; involved in repression; along with Mig1p; of SUC2 (invertase) expression by high levels of glucose; binds to Mig1p-binding sites in SUC2 promoter
zf-C2H2
MIG3
Jaspar
MA0339.1
Saccharomyces cerevisiae
Zinc-coordinating
Mig3
UniPROBE
UP00317
Saccharomyces cerevisiae
Probable transcriptional repressor involved in response to toxic agents such as hydroxyurea that inhibit ribonucleotide reductase; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p; a...
msh-like (muscle segment homeobox) homeobox protein 1
Msx1
UniPROBE
UP00234
Mus musculus
homeo box; msh-like 1
Homeo
MSX1-2.p2
SwissRegulon
Homo sapiens; Mus musculus
msh homeobox 1;msh homeobox 2
Msx2
UniPROBE
UP00156
Mus musculus
homeo box; msh-like 2
Homeo
MSX2
Hocomoco
M00211
human, Homo sapiens.
Msx3
UniPROBE
UP00171
Mus musculus
homeo box; msh-like 3
Homeo
Mtf1
UniPROBE
UP00097
Mus musculus
metal response element binding transcription factor 1: Metal response element binding transcription factor 1
zf-C2H2
MTF1
Hocomoco
M00212
human, Homo sapiens.
MTF1.p2
SwissRegulon
Homo sapiens; Mus musculus
metal-regulatory transcription factor 1
mtTFA
Transfac
M00487
Drosophila melanogaster
mitochondrial transcription factor A
MXL-1
UniPROBE
UP00373
Caenorhabditis elegans
MaX-Like: mxl-1 encodes a basic helix-loop-helix protein similar to the vertebrate MAX transcriptional regulators; in vitro; MXL-1 can heterodimerize; and bind an E-box DNA sequence; with MDL-1; a C. elegans MAD-like bHLH protein; mxl-1::gfp reporter fusions are expressed in the posterior intestine and in head and tail neurons.
High-mobility group non-histone chromatin protein; functionally redundant with Nhp6Bp; homologous to mammalian high mobility group proteins 1 and 2; acts to recruit transcription factor Rcs1p to ce...
HMG_box
NHP6B
Jaspar
MA0346.1
Saccharomyces cerevisiae
Other Alpha-Helix
Nhp6b
UniPROBE
UP00325
Saccharomyces cerevisiae
High-mobility group non-histone chromatin protein; functionally redundant with Nhp6Ap; homologous to mammalian high mobility group proteins 1 and 2; acts to recruit transcription factor Rcs1p to ce...
HMG_box
NIT2
Transfac
M00142
activator of nitrogen-regulated genes
NK7.1
Jaspar
MA0196.1
Drosophila melanogaster
Helix-Turn-Helix
NK7.1_Cell_FBgn0024321
Fly_Factor_Survey
Drosophila melanogaster
NK7.1_SOLEXA_FBgn0024321
Fly_Factor_Survey
Drosophila melanogaster
Nkx1-1
UniPROBE
UP00220
Mus musculus
NK1 transcription factor related; locus 1 (Drosophila)
Homeo
Nkx1-2
UniPROBE
UP00139
Mus musculus
NK1 transcription factor related; locus 2 (Drosophila)
Homeo
NKX2-1-4.p2
SwissRegulon
Homo sapiens; Mus musculus
NK2 homeobox 1;NK2 homeobox 4
Nkx2-2
Transfac
M00485
Mus musculus
NK2 class homeobox factor 2
Nkx2-2
UniPROBE
UP00231
Mus musculus
NK2 transcription factor related; locus 2 (Drosophila)
Homeo
NKX2-2-8.p2
SwissRegulon
Homo sapiens; Mus musculus
NK2 homeobox 2;NK2 homeobox 8
Nkx2-3
UniPROBE
UP00190
Mus musculus
NK2 transcription factor related; locus 3 (Drosophila)
Homeo
NKX2-3_NKX2-5.p2
SwissRegulon
Homo sapiens; Mus musculus
NK2 transcription factor related; locus 5 (Drosophila);NK2 transcription factor related; locus 3 (Drosophila)
Nkx2-4
UniPROBE
UP00107
Mus musculus
NK2 transcription factor related; locus 4 (Drosophila)
Homeo
Nkx2-5
Jaspar
MA0063.1
Mus musculus
Helix-Turn-Helix
Nkx2-5
Transfac
M00240
Mus musculus
homeo domain factor Nkx-25/Csx tinman homolog
Nkx2-5
Transfac
M00241
Mus musculus
homeo domain factor Nkx-25/Csx tinman homolog
Nkx2-5
UniPROBE
UP00249
Mus musculus
NK2 transcription factor related; locus 5 (Drosophila)
Homeo
Nkx2-6
UniPROBE
UP00147
Mus musculus
NK2 transcription factor related; locus 6 (Drosophila)
Homeo
Nkx2-9
UniPROBE
UP00119
Mus musculus
NK2 transcription factor related; locus 9 (Drosophila)
Homeo
NKX21
Hocomoco
M00240
human, Homo sapiens.
NKX22
Hocomoco
M00241
human, Homo sapiens.
NKX25
Hocomoco
M00242
human, Homo sapiens.
NKX28
Hocomoco
M00243
human, Homo sapiens.
NKX3-1
Jaspar
MA0124.1
Homo sapiens
Helix-Turn-Helix
Nkx3-1
Transfac
M00451
Homo sapiens
NK class homeobox factor 3A
Nkx3-1
UniPROBE
UP00389
Mus musculus
NK-3 transcription factor; locus 1 (Drosophila): Mus musculus homeobox-containing protein Nkx-3.1 mRNA
Homeo
NKX3-1.p2
SwissRegulon
Homo sapiens; Mus musculus
NK3 homeobox 1
Nkx3-2
Jaspar
MA0122.1
Mus musculus
Helix-Turn-Helix
NKX3-2.p2
SwissRegulon
Homo sapiens; Mus musculus
NK3 homeobox 2
NKX31
Hocomoco
M00244
human, Homo sapiens.
NKX32
Hocomoco
M00245
human, Homo sapiens.
Nkx6-1
Transfac
M00424
Mesocricetus auratus
NKX6-1
Nkx6-1
UniPROBE
UP00200
Mus musculus
NK6 transcription factor related; locus 1 (Drosophila)
Homeo
NKX6-1-2.p2
SwissRegulon
Homo sapiens; Mus musculus
NK6 homeobox 1;NK6 homeobox 2
Nkx6-3
UniPROBE
UP00238
Mus musculus
NK6 transcription factor related; locus 3 (Drosophila)
Homeo
Nobox
Jaspar
MA0125.1
Mus musculus
Helix-Turn-Helix
NOBOX
Hocomoco
M00246
human, Homo sapiens.
NR0B1
Hocomoco
M00247
human, Homo sapiens.
NR1D1
Hocomoco
M00248
human, Homo sapiens.
NR1H2
Hocomoco
M00249
human, Homo sapiens.
NR1H2::RXRA
Jaspar
MA0115.1
Homo sapiens
Zinc-coordinating
NR1H4
Hocomoco
M00250
human, Homo sapiens.
NR1H4.p2
SwissRegulon
Homo sapiens; Mus musculus
nuclear receptor subfamily 1; group H; member 4
NR1I2
Hocomoco
M00251
human, Homo sapiens.
NR1I2
Hocomoco
M00252
human, Homo sapiens.
NR1I3
Hocomoco
M00253
human, Homo sapiens.
NR1I3
Hocomoco
M00254
human, Homo sapiens.
NR2C1
Hocomoco
M00255
human, Homo sapiens.
NR2C2
Hocomoco
M00256
human, Homo sapiens.
Nr2e3
Jaspar
MA0164.1
Mus musculus
Zinc-coordinating
NR2E3
Hocomoco
M00257
human, Homo sapiens.
NR2F1
Jaspar
MA0017.1
Homo sapiens
Zinc-coordinating
Nr2f2
UniPROBE
UP00009
Mus musculus
nuclear receptor subfamily 2; group F; member 2: Mus musculus nuclear receptor subfamily 2; group F; member 2 (Nr2f2); transcript variant 1; mRNA.
ZnF_C4
NR2F6
Hocomoco
M00258
human, Homo sapiens.
NR3C1
Jaspar
MA0113.1
Homo sapiens- Mus musculus- Rattus norvegicus- Gallus gallus and Oncorhynchus mykiss
Zinc-coordinating
NR3C1.p2
SwissRegulon
Homo sapiens; Mus musculus
nuclear receptor subfamily 3; group C; member 1 (glucocorticoid receptor)
NR4A1
Hocomoco
M00259
human, Homo sapiens.
NR4A2
Jaspar
MA0160.1
Mus musculus- Homo sapiens and Rattus norvegicus
Zinc-coordinating
NR4A2
Hocomoco
M00260
human, Homo sapiens.
NR4A2.p2
SwissRegulon
Homo sapiens; Mus musculus
nuclear receptor subfamily 4; group A; member 2 - monomer
NR4A3
Hocomoco
M00261
human, Homo sapiens.
NR5A1-2.p2
SwissRegulon
Homo sapiens; Mus musculus
nuclear receptor subfamily 5; group A; member 1;nuclear receptor subfamily 5; group A; member 2
NR5A2
Hocomoco
M00262
human, Homo sapiens.
NR6A1
Hocomoco
M00263
human, Homo sapiens.
NR6A1.p2
SwissRegulon
Homo sapiens; Mus musculus
nuclear receptor subfamily 6; group A; member 1
NRF-2/GABP
Transfac
M00108
Cercopithecus aethiops
nuclear respiratory factor 2
NRF1
Hocomoco
M00264
human, Homo sapiens.
NRF1.p2
SwissRegulon
Homo sapiens; Mus musculus
nuclear respiratory factor 1
NRG1
Jaspar
MA0347.1
Saccharomyces cerevisiae
Zinc-coordinating
Nrg1
UniPROBE
UP00270
Saccharomyces cerevisiae
Transcriptional repressor that recruits the Cyc8p-Tup1p complex to promoters
zf-C2H2
NRSF
Transfac
M00256
Homo sapiens
neuron-restrictive silencer factor
nub
Jaspar
MA0453.1
Drosophila melanogaster
Zinc-coordinating
nub_FlyReg_FBgn0085424
Fly_Factor_Survey
Drosophila melanogaster
nub_NAR_FBgn0085424
Fly_Factor_Survey
Drosophila melanogaster
nub_SOLEXA_5_FBgn0085424
Fly_Factor_Survey
Drosophila melanogaster
OAF1
Jaspar
MA0348.1
Saccharomyces cerevisiae
Zinc-coordinating
Oaf1
UniPROBE
UP00298
Saccharomyces cerevisiae
Oleate-activated transcription factor; acts alone and as a heterodimer with Pip2p; activates genes involved in beta-oxidation of fatty acids and peroxisome organization and biogenesis
Zn2Cys6
Obox1
UniPROBE
UP00216
Mus musculus
oocyte specific homeobox 1
Homeo
Obox2
UniPROBE
UP00239
Mus musculus
oocyte specific homeobox 2
Homeo
Obox3
UniPROBE
UP00160
Mus musculus
oocyte specific homeobox 3
Homeo
Obox5
UniPROBE
UP00208
Mus musculus
oocyte specific homeobox 5
Homeo
Obox6
UniPROBE
UP00109
Mus musculus
oocyte specific homeobox 6
Homeo
oc
Jaspar
MA0234.1
Drosophila melanogaster
Helix-Turn-Helix
Oc_Cell_FBgn0004102
Fly_Factor_Survey
Drosophila melanogaster
Oc_SOLEXA_FBgn0004102
Fly_Factor_Survey
Drosophila melanogaster
Oct
Jaspar
MA0197.1
Drosophila melanogaster
Helix-Turn-Helix
Oct-1
Transfac
M00135
Rattus norvegicus
octamer factor 1
Oct-1
Transfac
M00136
Rattus norvegicus
octamer factor 1
Oct-1
Transfac
M00137
Rattus norvegicus
octamer factor 1
Oct-1
Transfac
M00138
Rattus norvegicus
octamer factor 1
Oct-1
Transfac
M00161
Rattus norvegicus
octamer-binding factor 1
Oct-1
Transfac
M00162
Rattus norvegicus
octamer-binding factor 1
Oct-1
Transfac
M00195
Rattus norvegicus
octamer factor 1
Oct-1
Transfac
M00248
Rattus norvegicus
octamer factor 1
Oct-1
UniPROBE
UP00399
Homo sapiens
"POU domain; class 2; transcription factor 1: ""POU domain; class 2; transcription factor 1"""
odd-skipped related 2 (Drosophila): odd-skipped related 2 (Drosophila) (Osr2); mRNA
zf-C2H2
otp
Jaspar
MA0236.1
Drosophila melanogaster
Helix-Turn-Helix
Otp
UniPROBE
UP00237
Mus musculus
orthopedia homolog (Drosophila)
Homeo
Otp_Cell_FBgn0015524
Fly_Factor_Survey
Drosophila melanogaster
Otp_SOLEXA_FBgn0015524
Fly_Factor_Survey
Drosophila melanogaster
Otx1
UniPROBE
UP00229
Mus musculus
orthodenticle homolog 1 (Drosophila)
Homeo
OTX1
Hocomoco
M00266
human, Homo sapiens.
Otx2
UniPROBE
UP00267
Mus musculus
orthodenticle homolog 2 (Drosophila)
Homeo
OTX2
Hocomoco
M00267
human, Homo sapiens.
ovo
Jaspar
MA0126.1
Drosophila melanogaster
Zinc-coordinating
Ovo
Transfac
M00461
Drosophila melanogaster
ovo_FlyReg_FBgn0003028
Fly_Factor_Survey
Drosophila melanogaster
ovo_SANGER_5_FBgn0003028
Fly_Factor_Survey
Drosophila melanogaster
ovo_SOLEXA_5_FBgn0003028
Fly_Factor_Survey
Drosophila melanogaster
OVOL1
Hocomoco
M00268
human, Homo sapiens.
P
Transfac
M00226
Zea mays
maize activator P of flavonoid biosynthetic genes
p300
Transfac
M00033
Homo sapiens
p300
p53
Transfac
M00034
Mus musculus
tumor suppressor p53
p53
Transfac
M00272
Mus musculus
tumor suppressor p53
P53
Hocomoco
M00269
human, Homo sapiens.
P63
Hocomoco
M00270
human, Homo sapiens.
P73
Hocomoco
M00271
human, Homo sapiens.
PacC
Transfac
M00247
Emericella nidulans
pH-responsive regulator from Aspergillus
pad_SANGER_5_FBgn0038418
Fly_Factor_Survey
Drosophila melanogaster
pad_SOLEXA_5_FBgn0038418
Fly_Factor_Survey
Drosophila melanogaster
pan
Jaspar
MA0237.1
Drosophila melanogaster
Other Alpha-Helix
pan_FlyReg_FBgn0085432
Fly_Factor_Survey
Drosophila melanogaster
PATZ1.p2
SwissRegulon
Homo sapiens; Mus musculus
POZ (BTB) and AT hook containing zinc finger 1
Pax-2
Transfac
M00098
Mus musculus
Pax-2
Pax-2
Transfac
M00486
Brachydanio rerio
paired box factor 2
Pax-3
Transfac
M00360
Mus musculus
Pax-3 binding sites
Pax-4
Transfac
M00373
Mus musculus
Pax-4 binding sites
Pax-4
Transfac
M00377
Mus musculus
Pax-4 binding sites
Pax-4
Transfac
M00378
Mus musculus
Pax-4 binding sites
Pax-4
Transfac
M00380
Mus musculus
Pax-4 binding sites
Pax-5
Transfac
M00143
Homo sapiens
B-cell-specific activating protein
Pax-5
Transfac
M00144
Homo sapiens
B-cell-specific activating protein
Pax-6
Transfac
M00097
Mus musculus
Pax-6
Pax2
Jaspar
MA0067.1
Mus musculus
Helix-Turn-Helix
PAX2
Hocomoco
M00272
human, Homo sapiens.
PAX2
Hocomoco
M00273
human, Homo sapiens.
PAX2.p2
SwissRegulon
Homo sapiens; Mus musculus
paired box 2
PAX3-7.p2
SwissRegulon
Homo sapiens; Mus musculus
paired box 7;paired box 3
Pax4
Jaspar
MA0068.1
Mus musculus
Helix-Turn-Helix
Pax4
UniPROBE
UP00247
Mus musculus
paired box gene 4
Homeo, PAX
PAX4.p2
SwissRegulon
Homo sapiens; Mus musculus
paired box 4
Pax5
Jaspar
MA0014.1
Mus musculus
Helix-Turn-Helix
PAX5
Hocomoco
M00274
human, Homo sapiens.
PAX5
Hocomoco
M00275
human, Homo sapiens.
PAX5.p2
SwissRegulon
Homo sapiens; Mus musculus
paired box 5
Pax6
Jaspar
MA0069.1
Homo sapiens
Helix-Turn-Helix
Pax6
UniPROBE
UP00224
Mus musculus
paired box gene 6
Homeo, PAX
PAX6
Hocomoco
M00276
human, Homo sapiens.
PAX6.p2
SwissRegulon
Homo sapiens; Mus musculus
paired box 6
Pax7
UniPROBE
UP00248
Mus musculus
paired box gene 7
Homeo, PAX
PAX8
Hocomoco
M00277
human, Homo sapiens.
PAX8.p2
SwissRegulon
Homo sapiens; Mus musculus
paired box 8
pb
Jaspar
MA0238.1
Drosophila melanogaster
Helix-Turn-Helix
Pb_Cell_FBgn0051481
Fly_Factor_Survey
Drosophila melanogaster
Pb_SOLEXA_FBgn0051481
Fly_Factor_Survey
Drosophila melanogaster
PBF
Jaspar
MA0064.1
Zea mays
Zinc-coordinating
PBF
Transfac
M00355
Zea mays
PBF (MPBF)
Pbf1
UniPROBE
UP00328
Saccharomyces cerevisiae
Myb domain-containing protein YBL054W
Myb
Pbf2
UniPROBE
UP00280
Saccharomyces cerevisiae
Protein of unknown function; involved in telomeric gene silencing and filamentation
Myb
Pbx-1
Transfac
M00096
Homo sapiens
Pbx-1
Pbx-1b
Transfac
M00124
Homo sapiens
homeo domain factor Pbx-1
PBX1
Jaspar
MA0070.1
Homo sapiens
Helix-Turn-Helix
Pbx1
UniPROBE
UP00185
Mus musculus
pre B-cell leukemia transcription factor 1
Homeo
PBX1
Hocomoco
M00278
human, Homo sapiens.
PBX1.p2
SwissRegulon
Homo sapiens; Mus musculus
pre-B-cell leukemia homeobox 1
PBX2
Hocomoco
M00279
human, Homo sapiens.
PBX3
Hocomoco
M00280
human, Homo sapiens.
pdm2_SOLEXA_5_FBgn0004394
Fly_Factor_Survey
Drosophila melanogaster
pdm3_SOLEXA_5_FBgn0033288
Fly_Factor_Survey
Drosophila melanogaster
PDR1
Jaspar
MA0352.1
Saccharomyces cerevisiae
Zinc-coordinating
Pdr1
UniPROBE
UP00290
Saccharomyces cerevisiae
Zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance ...
Zn2Cys6
PDR3
Jaspar
MA0353.1
Saccharomyces cerevisiae
Zinc-coordinating
PDR8
Jaspar
MA0354.1
Saccharomyces cerevisiae
Zinc-coordinating
Pdx1
Jaspar
MA0132.1
Mus musculus
Helix-Turn-Helix
PDX1
Hocomoco
M00281
human, Homo sapiens.
PDX1.p2
SwissRegulon
Homo sapiens; Mus musculus
pancreatic and duodenal homeobox 1
peb-F1-3_SANGER_2.5_FBgn0003053
Fly_Factor_Survey
Drosophila melanogaster
peb-F1-3_SOLEXA_FBgn0003053
Fly_Factor_Survey
Drosophila melanogaster
peb-F5-7_SOLEXA_FBgn0003053
Fly_Factor_Survey
Drosophila melanogaster
PEBB
Hocomoco
M00282
human, Homo sapiens.
PEND
Jaspar
MA0127.1
Pisum sativum
Zipper-Type
PF14_0633
UniPROBE
UP00394
Plasmodium falciparum
putative Plasmodium falciparum transcription factor; single AP2 domain
AP2
PFF0200c
UniPROBE
UP00393
Plasmodium falciparum
putative Plasmodium falciparum transcription factor; tandem double AP2 domain
AP2
pfk_SANGER_5_FBgn0035405
Fly_Factor_Survey
Drosophila melanogaster
PHD1
Jaspar
MA0355.1
Saccharomyces cerevisiae
Other
Phd1
UniPROBE
UP00351
Saccharomyces cerevisiae
Transcriptional activator that enhances pseudohyphal growth; regulates expression of FLO11; an adhesin required for pseudohyphal filament formation; similar to StuA; an A. nidulans developmental re..
paired related homeobox 2;paired related homeobox 1
Prrx2
Jaspar
MA0075.1
Mus musculus
Helix-Turn-Helix
Prrx2
UniPROBE
UP00136
Mus musculus
paired related homeobox 2
Homeo
PRRX2
Hocomoco
M00306
human, Homo sapiens.
PTF1A
Hocomoco
M00307
human, Homo sapiens.
Ptx1
Jaspar
MA0201.1
Drosophila melanogaster
Helix-Turn-Helix
Ptx1_Cell_FBgn0020912
Fly_Factor_Survey
Drosophila melanogaster
Ptx1_SOLEXA_FBgn0020912
Fly_Factor_Survey
Drosophila melanogaster
PURA
Hocomoco
M00308
human, Homo sapiens.
PUT3
Jaspar
MA0358.1
Saccharomyces cerevisiae
Zinc-coordinating
Put3
UniPROBE
UP00335
Saccharomyces cerevisiae
Transcriptional activator of proline utilization genes; constitutively binds PUT1 and PUT2 promoter sequences and undergoes a conformational change to form the active state; has a Zn(2)-Cys(6) binu...
Zn2Cys6
qa-1F
Transfac
M00047
qa-1F
R
Transfac
M00273
Epstein-Barr virus
Epstein-Barr virus transcription factor R
RAP1
Jaspar
MA0359.1
Saccharomyces cerevisiae
Helix-Turn-Helix
RAP1
Transfac
M00213
Saccharomyces cerevisiae
yeast repressor/activator protein 1
Rap1
UniPROBE
UP00398
Saccharomyces cerevisiae
DNA-binding protein involved in either activation or repression of transcription; depending on binding site context; also binds telomere sequences and plays a role in telomeric position effect (sil...
Myb
Rap1
UniPROBE
UP00321
Saccharomyces cerevisiae
DNA-binding protein involved in either activation or repression of transcription; depending on binding site context; also binds telomere sequences and plays a role in telomeric position effect (sil...
Myb
RARA
Hocomoco
M00309
human, Homo sapiens.
RARA
Hocomoco
M00310
human, Homo sapiens.
RARB
Hocomoco
M00311
human, Homo sapiens.
RARG
Hocomoco
M00312
human, Homo sapiens.
RARG
Hocomoco
M00313
human, Homo sapiens.
RAV1
Transfac
M00343
Arabidopsis thaliana
5'-part of bipartite RAV1 binding site interacting with AP2 domain
RAV1
Transfac
M00344
Arabidopsis thaliana
3'-part of bipartite RAV1 binding site interacting with AP2 domain
Rax
UniPROBE
UP00253
Mus musculus
retina and anterior neural fold homeobox
Homeo
RBPJ.p2
SwissRegulon
Homo sapiens; Mus musculus
recombination signal binding protein for immunoglobulin kappa J region
RDR1
Jaspar
MA0360.1
Saccharomyces cerevisiae
Zinc-coordinating
Rdr1
UniPROBE
UP00269
Saccharomyces cerevisiae
Transcriptional repressor involved in the control of multidrug resistance
Zn2Cys6
RDS1
Jaspar
MA0361.1
Saccharomyces cerevisiae
Zinc-coordinating
Rds1
UniPROBE
UP00296
Saccharomyces cerevisiae
Zinc cluster protein involved in conferring resistance to cycloheximide
Zn2Cys6
RDS2
Jaspar
MA0362.1
Saccharomyces cerevisiae
Zinc-coordinating
Rds2
UniPROBE
UP00302
Saccharomyces cerevisiae
Zinc cluster protein involved in conferring resistance to ketoconazole
Zn2Cys6
REB1
Jaspar
MA0363.1
Saccharomyces cerevisiae
Helix-Turn-Helix
REF-1
UniPROBE
UP00383
Caenorhabditis elegans
REgulator of Fusion: ref-1 encodes a protein with two basic helix-loop-helix (bHLH) domains that is distantly related to the hairy/Enhancer of split subfamily of bHLH transcription factors; REF-1 is required in hermaphrodites during early larval development for regulating the pattern of posterior Pn.p hypodermal cell fusions; primarily through regulation of MAB-5 homeodomain protein activity; REF-1 is also required for head morphogenesis and specification of the V6 lateral seam cell fate; in males; ref-1 is a target of MAB-3 transcriptional repression which in turn; promotes expression of LIN-32; a proneural bHLH transcription factor.
bHLH
REI1
Jaspar
MA0364.1
Saccharomyces cerevisiae
Zinc-coordinating
REL
Jaspar
MA0101.1
Homo sapiens
Ig-fold
REL
Hocomoco
M00315
human, Homo sapiens.
Rel_SANGER_5_FBgn0014018
Fly_Factor_Survey
Drosophila melanogaster
RELA
Jaspar
MA0107.1
Homo sapiens
Ig-fold
RELB
Hocomoco
M00314
human, Homo sapiens.
repo
Jaspar
MA0240.1
Drosophila melanogaster
Helix-Turn-Helix
Repo_Cell_FBgn0011701
Fly_Factor_Survey
Drosophila melanogaster
Repo_SOLEXA_FBgn0011701
Fly_Factor_Survey
Drosophila melanogaster
repressor
Transfac
M00014
Saccharomyces cerevisiae
repressor of CAR1 expression
REST
Jaspar
MA0138.2
Homo sapiens
Zinc-coordinating
REST
Hocomoco
M00316
human, Homo sapiens.
REST.p3
SwissRegulon
Homo sapiens; Mus musculus
RE1-silencing transcription factor
retn_SANGER_5_FBgn0004795
Fly_Factor_Survey
Drosophila melanogaster
Retroviral
Transfac
M00212
Retroviral Poly A signal
RFX1
Jaspar
MA0365.1
Saccharomyces cerevisiae
Winged Helix-Turn-Helix
RFX1
Transfac
M00280
Mus musculus
X-box binding protein RFX1
RFX1
Transfac
M00281
Mus musculus
X-box binding protein RFX1
RFX1
Hocomoco
M00317
human, Homo sapiens.
RFX1..5_RFXANK_RFXAP.p2
SwissRegulon
Homo sapiens; Mus musculus
regulatory factor X; 1 (influences HLA class II expression);regulatory factor X-associated protein;regulatory factor X; 5 (influences HLA class II expression);BLS;RFX-B;ANKRA1;F14150_1;MGC138628;5991;regulatory factor X; 2 (influences HLA class II expression)
RFX2
Hocomoco
M00318
human, Homo sapiens.
Rfx3
UniPROBE
UP00098
Mus musculus
regulatory factor X; 3 (influences HLA class II expression)
RFX
RFX3
Hocomoco
M00319
human, Homo sapiens.
Rfx4
UniPROBE
UP00056
Mus musculus
regulatory factor X; 4 (influences HLA class II expression)
RFX
Rfxdc2
UniPROBE
UP00076
Mus musculus
regulatory factor X domain containing 2 homolog (human): AK138890
RFX
RGM1
Jaspar
MA0366.1
Saccharomyces cerevisiae
Zinc-coordinating
RGT1
Jaspar
MA0367.1
Saccharomyces cerevisiae
Zinc-coordinating
Rgt1
UniPROBE
UP00288
Saccharomyces cerevisiae
Glucose-responsive transcription factor that regulates expression of several glucose transporter (HXT) genes in response to glucose
Zn2Cys6
Rhox11
UniPROBE
UP00193
Mus musculus
reproductive homeobox 11
Homeo
Rhox6
UniPROBE
UP00116
Mus musculus
reproductive homeobox 6
Homeo
rib_SANGER_5_FBgn0003254
Fly_Factor_Survey
Drosophila melanogaster
RIM101
Jaspar
MA0368.1
Saccharomyces cerevisiae
Zinc-coordinating
RLM1
Jaspar
MA0369.1
Saccharomyces cerevisiae
Other Alpha-Helix
RME1
Jaspar
MA0370.1
Saccharomyces cerevisiae
Zinc-coordinating
rn_SANGER_10_FBgn0259172
Fly_Factor_Survey
Drosophila melanogaster
rn_SOLEXA_5_FBgn0259172
Fly_Factor_Survey
Drosophila melanogaster
ro
Jaspar
MA0241.1
Drosophila melanogaster
Helix-Turn-Helix
Ro_Cell_FBgn0003267
Fly_Factor_Survey
Drosophila melanogaster
Ro_SOLEXA_FBgn0003267
Fly_Factor_Survey
Drosophila melanogaster
Roaz
Transfac
M00467
Rattus norvegicus
rat Olf-1/EBF-associated zinc finger protein
RORA
Hocomoco
M00320
human, Homo sapiens.
RORA_1
Jaspar
MA0071.1
Homo sapiens
Zinc-coordinating
RORA_2
Jaspar
MA0072.1
Homo sapiens
Zinc-coordinating
RORA.p2
SwissRegulon
Homo sapiens; Mus musculus
RAR-related orphan receptor A
RORalpha1
Transfac
M00156
Homo sapiens
RAR-related orphan receptor alpha1
RORalpha2
Transfac
M00157
Homo sapiens
RAR-related orphan receptor alpha2
RORG
Hocomoco
M00321
human, Homo sapiens.
ROX1
Jaspar
MA0371.1
Saccharomyces cerevisiae
Other Alpha-Helix
RP58
Transfac
M00532
Homo sapiens
58 KDA repressor protein
RPH1
Jaspar
MA0372.1
Saccharomyces cerevisiae
Zinc-coordinating
Rph1
UniPROBE
UP00348
Saccharomyces cerevisiae
Transcriptional repressor of PHR1; which is a photolyase induced by DNA damage; binds to AG(4) (C(4)T) sequence upstream of PHR1; Rph1p phosphorylation during DNA damage is under control of the MEC...
zf-C2H2
RPN4
Jaspar
MA0373.1
Saccharomyces cerevisiae
Zinc-coordinating
Rpn4
UniPROBE
UP00272
Saccharomyces cerevisiae
Transcription factor that stimulates expression of proteasome genes
zf-C2H2
RREB-1
Transfac
M00257
Homo sapiens
Ras-responsive element binding protein 1
RREB1
Jaspar
MA0073.1
Homo sapiens
Zinc-coordinating
RREB1
Hocomoco
M00322
human, Homo sapiens.
RREB1.p2
SwissRegulon
Homo sapiens; Mus musculus
ras responsive element binding protein 1
RSC3
Jaspar
MA0374.1
Saccharomyces cerevisiae
Zinc-coordinating
Rsc3
UniPROBE
UP00286
Saccharomyces cerevisiae
One of 15 subunits of the 'Remodel the Structure of Chromatin' (RSC) complex
Zn2Cys6
RSC30
Jaspar
MA0375.1
Saccharomyces cerevisiae
Zinc-coordinating
Rsc30
UniPROBE
UP00279
Saccharomyces cerevisiae
One of 15 subunits of the 'Remodel the Structure of Chromatin' (RSC) complex
Zn2Cys6
RSRFC4
Transfac
M00026
Homo sapiens
related to serum response factor C4
RTG3
Jaspar
MA0376.1
Saccharomyces cerevisiae
Zipper-Type
Rtg3
UniPROBE
UP00356
Saccharomyces cerevisiae
Basic helix-loop-helix-leucine zipper (bHLH/Zip) transcription factor that forms a complex with another bHLH/Zip protein; Rtg1p; to activate the retrograde (RTG) and TOR pathways
retinoid X receptor; alpha;retinoid X receptor; beta;retinoid X receptor; gamma
RXR::RAR_DR5
Jaspar
MA0159.1
Homo sapiens
Zinc-coordinating
Rxra
UniPROBE
UP00053
Mus musculus
retinoid X receptor alpha: retinoid X receptor alpha (Rxra); mRNA
ZnF_C4
RXRA
Hocomoco
M00326
human, Homo sapiens.
RXRA_VDR_dimer_.p2
SwissRegulon
Homo sapiens; Mus musculus
vitamin D (1;25- dihydroxyvitamin D3) receptor
RXRA::VDR
Jaspar
MA0074.1
Homo sapiens
Zinc-coordinating
RXRB
Hocomoco
M00327
human, Homo sapiens.
RXRG
Hocomoco
M00328
human, Homo sapiens.
RXRG_dimer.p3
SwissRegulon
Homo sapiens; Mus musculus
nuclear receptor subfamily 1; group H; member 2;retinoid X receptor; alpha;peroxisome proliferator-activated receptor gamma;NM_005036;NR2B2;H-2RIIBP;RCoR-1;
S8
Transfac
M00099
Mus musculus
S8
sage_da_SANGER_5_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
sage_da_SANGER_5_FBgn0037672
Fly_Factor_Survey
Drosophila melanogaster
salr-F3-5_SOLEXA_FBgn0000287
Fly_Factor_Survey
Drosophila melanogaster
SBF-1
Transfac
M00149
Phaseolus vulgaris
SBF-1
sc_da_SANGER_10_FBgn0000413
Fly_Factor_Survey
Drosophila melanogaster
sc_da_SANGER_10_FBgn0004170
Fly_Factor_Survey
Drosophila melanogaster
Scr
Jaspar
MA0203.1
Drosophila melanogaster
Helix-Turn-Helix
Scr_Cell_FBgn0003339
Fly_Factor_Survey
Drosophila melanogaster
Scr_SOLEXA_FBgn0003339
Fly_Factor_Survey
Drosophila melanogaster
scrt_SANGER_2.5_FBgn0004880
Fly_Factor_Survey
Drosophila melanogaster
scrt_SOLEXA_2.5_1_FBgn0004880
Fly_Factor_Survey
Drosophila melanogaster
scrt_SOLEXA_2.5_2_FBgn0004880
Fly_Factor_Survey
Drosophila melanogaster
sd
Jaspar
MA0243.1
Drosophila melanogaster
Helix-Turn-Helix
sd_FlyReg_FBgn0003345
Fly_Factor_Survey
Drosophila melanogaster
SEF-1
Transfac
M00214
Mus musculus
SEF1 binding site
sens_SANGER_10_FBgn0002573
Fly_Factor_Survey
Drosophila melanogaster
sens_SOLEXA_5_FBgn0002573
Fly_Factor_Survey
Drosophila melanogaster
sens-2_SANGER_2.5_FBgn0051632
Fly_Factor_Survey
Drosophila melanogaster
sens2_SOLEXA_FBgn0051632
Fly_Factor_Survey
Drosophila melanogaster
SFL1
Jaspar
MA0377.1
Saccharomyces cerevisiae
Winged Helix-Turn-Helix
Sfl1
UniPROBE
UP00320
Saccharomyces cerevisiae
Transcription repressor involved in regulation of flocculation-related genes; inhibits transcription by recruiting general corepressor Cyc8p-Tup1p to different promoters; negatively regulated by cA...
HSF_DNA-bind
SFP1
Jaspar
MA0378.1
Saccharomyces cerevisiae
Zinc-coordinating
Sfp1
UniPROBE
UP00342
Saccharomyces cerevisiae
Transcription factor that controls expression of many ribosome biogenesis genes in response to nutrients and stress; regulates G2/M transitions during mitotic cell cycle and DNA-damage response; in...
C6 zinc cluster transcriptional activator that binds to the carbon source-responsive element (CSRE) of gluconeogenic genes
Zn2Cys6
Six1
UniPROBE
UP00192
Mus musculus
sine oculis-related homeobox 1 homolog (Drosophila)
Homeo
Six2
UniPROBE
UP00159
Mus musculus
sine oculis-related homeobox 2 homolog (Drosophila)
Homeo
Six3
UniPROBE
UP00195
Mus musculus
sine oculis-related homeobox 3 homolog (Drosophila): Mus musculus sine oculis-related homeobox 3 homolog (Drosophila) (Six3); mRNA.
Homeo
Six4
Jaspar
MA0204.1
Drosophila melanogaster
Helix-Turn-Helix
Six4
UniPROBE
UP00199
Mus musculus
sine oculis-related homeobox 4 homolog (Drosophila)
Homeo
Six4_Cell_FBgn0027364
Fly_Factor_Survey
Drosophila melanogaster
Six4_SOLEXA_2_FBgn0027364
Fly_Factor_Survey
Drosophila melanogaster
Six4_SOLEXA_FBgn0027364
Fly_Factor_Survey
Drosophila melanogaster
Six6
UniPROBE
UP00008
Mus musculus
sine oculis-related homeobox 6 homolog (Drosophila)
Homeo
Skn-1
Transfac
M00229
maternal gene product
Skn-1
Transfac
M00230
maternal gene product
SKN7
Jaspar
MA0381.1
Saccharomyces cerevisiae
Winged Helix-Turn-Helix
Skn7
UniPROBE
UP00313
Saccharomyces cerevisiae
Nuclear response regulator and transcription factor; part of a branched two-component signaling system; required for optimal induction of heat-shock genes in response to oxidative stress;
HSF_DNA-bind
SKO1
Jaspar
MA0382.1
Saccharomyces cerevisiae
Zipper-Type
slbo
Jaspar
MA0244.1
Drosophila melanogaster
Zinc-coordinating
slbo_FlyReg_FBgn0005638
Fly_Factor_Survey
Drosophila melanogaster
slbo_SANGER_5_FBgn0005638
Fly_Factor_Survey
Drosophila melanogaster
slou
Jaspar
MA0245.1
Drosophila melanogaster
Helix-Turn-Helix
Slou_Cell_FBgn0002941
Fly_Factor_Survey
Drosophila melanogaster
Slou_SOLEXA_FBgn0002941
Fly_Factor_Survey
Drosophila melanogaster
slp1
Jaspar
MA0458.1
Drosophila melanogaster
Winged Helix-Turn-Helix
slp1_NAR_FBgn0003430
Fly_Factor_Survey
Drosophila melanogaster
slp2_SANGER_5_FBgn0004567
Fly_Factor_Survey
Drosophila melanogaster
SMAD1
Hocomoco
M00329
human, Homo sapiens.
SMAD1..7-9.p2
SwissRegulon
Homo sapiens; Mus musculus
SMAD family member 5;SMAD family member 1;SMAD family member 3;SMAD family member 4;SMAD family member 2;SMAD family member 6;SMAD family member 7;SMAD
SMAD2
Hocomoco
M00330
human, Homo sapiens.
Smad3
UniPROBE
UP00000
Mus musculus
MAD homolog 3 (Drosophila)
DWA
SMAD3
Hocomoco
M00331
human, Homo sapiens.
SMAD4
Hocomoco
M00332
human, Homo sapiens.
SMP1
Jaspar
MA0383.1
Saccharomyces cerevisiae
Other Alpha-Helix
Smp1
UniPROBE
UP00294
Saccharomyces cerevisiae
Putative transcription factor involved in regulating the response to osmotic stress
SRY (sex determining region Y)-box 4 : This intronless gene encodes a member of the SOX (SRY-related HMG-box) family of transcription factors involved in the regulation of embryonic development and in the determination of the cell fate. The encoded protein may act as a transcriptional regulator after forming a protein complex with other proteins; such as syndecan binding protein (syntenin). The protein may function
TATA-binding protein; general transcription factor that interacts with other factors to form the preinitiation complex at promoters; essential for viability
TBP
SPT2
Jaspar
MA0387.1
Saccharomyces cerevisiae
Other Alpha-Helix
SPT23
Jaspar
MA0388.1
Saccharomyces cerevisiae
Other
Spz1
Jaspar
MA0111.1
Mus musculus
Other
Spz1
Transfac
M00446
Mus musculus
spermatogenic Zip
SPZ1
Hocomoco
M00352
human, Homo sapiens.
SPZ1.p2
SwissRegulon
Homo sapiens; Mus musculus
spermatogenic leucine zipper 1
squamosa
Jaspar
MA0082.1
Antirrhinum majus
Other Alpha-Helix
sqz_SANGER_5_FBgn0010768
Fly_Factor_Survey
Drosophila melanogaster
sqz_SOLEXA_5_FBgn0010768
Fly_Factor_Survey
Drosophila melanogaster
sr_SANGER_5_FBgn0003499
Fly_Factor_Survey
Drosophila melanogaster
sr_SOLEXA_5_FBgn0003499
Fly_Factor_Survey
Drosophila melanogaster
SRBP1
Hocomoco
M00353
human, Homo sapiens.
SRBP2
Hocomoco
M00354
human, Homo sapiens.
SRD1
Jaspar
MA0389.1
Saccharomyces cerevisiae
Zinc-coordinating
Srd1
UniPROBE
UP00304
Saccharomyces cerevisiae
Protein involved in the processing of pre-rRNA to mature rRNA
GATA
SREBF1-2.p2
SwissRegulon
Homo sapiens; Mus musculus
sterol regulatory element binding transcription factor 1;sterol regulatory element binding transcription factor 2
signal transducers and activators of transcription
STAT1
Jaspar
MA0137.2
Homo sapiens
Ig-fold
STAT1
Transfac
M00224
Mus musculus
signal transducer and activator of transcription 1
STAT1
Transfac
M00496
Homo sapiens
signal transducer and activator of transcription 1
STAT1
Hocomoco
M00359
human, Homo sapiens.
STAT1-3.p3
SwissRegulon
Homo sapiens; Mus musculus
signal transducer and activator of transcription 1; 91kDa;signal transducer and activator of transcription 3 (acute-phase response factor)
STAT2
Hocomoco
M00360
human, Homo sapiens.
STAT2-4-6.p2
SwissRegulon
Homo sapiens; Mus musculus
signal transducer and activator of transcription 2; 113kDa;signal transducer and activator of transcription 4;signal transducer and activator of transcription 6; interleukin-4 induced
Stat3
Jaspar
MA0144.1
Mus musculus
Ig-fold
STAT3
Transfac
M00225
Homo sapiens
signal transducer and activator of transcription 3
STAT3
Transfac
M00497
Homo sapiens
signal transducer and activator of transcription 3
STAT3
Hocomoco
M00361
human, Homo sapiens.
STAT4
Transfac
M00498
Homo sapiens
signal transducer and activator of transcription 4
STAT4
Hocomoco
M00362
human, Homo sapiens.
STAT5_A-B_.p2
SwissRegulon
Homo sapiens; Mus musculus
signal transducer and activator of transcription 5B;signal transducer and activator of transcription 5A
STAT5A
Transfac
M00457
Homo sapiens
signal transducer and activator of transcription 5a
STAT5A
Transfac
M00460
Homo sapiens
STAT5A
Transfac
M00499
Homo sapiens
signal transducer and activator of transcription 5a
STAT5B
Transfac
M00459
Ovis aries
signal transducer and activator of transcription 5b
STAT6
Transfac
M00500
Mus musculus
signal transducer and activator of transcription 6
STAT6
Hocomoco
M00363
human, Homo sapiens.
STATx
Transfac
M00223
Mus musculus
signal transducers and activators of transcription
STB3
Jaspar
MA0390.1
Saccharomyces cerevisiae
Other
Stb3
UniPROBE
UP00275
Saccharomyces cerevisiae
Protein that binds Sin3p in a two-hybrid assay
Stb3
STB4
Jaspar
MA0391.1
Saccharomyces cerevisiae
Zinc-coordinating
STB5
Jaspar
MA0392.1
Saccharomyces cerevisiae
Zinc-coordinating
STE11
Transfac
M00274
Schizosaccharomyces pombe
TR-boxes interacting with ubiquitous factor STE11
STE12
Jaspar
MA0393.1
Saccharomyces cerevisiae
Helix-Turn-Helix
STF1
Hocomoco
M00364
human, Homo sapiens.
STP1
Jaspar
MA0394.1
Saccharomyces cerevisiae
Zinc-coordinating
STP2
Jaspar
MA0395.1
Saccharomyces cerevisiae
Zinc-coordinating
Stp2
UniPROBE
UP00338
Saccharomyces cerevisiae
Transcription factor; activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes
zf-C2H2
STP3
Jaspar
MA0396.1
Saccharomyces cerevisiae
Zinc-coordinating
STP4
Jaspar
MA0397.1
Saccharomyces cerevisiae
Zinc-coordinating
Stp4
UniPROBE
UP00354
Saccharomyces cerevisiae
Protein containing a Kruppel-type zinc-finger domain; has similarity to Stp1p; Stp2p; and Stp3p
zf-C2H2
STRE
Transfac
M00154
stress-response element
StuAp
Transfac
M00263
Emericella nidulans
Aspergillus Stunted protein
Su(H)
Jaspar
MA0085.1
Drosophila melanogaster
Other
Su(H)
Transfac
M00234
Drosophila melanogaster
Suppressor of Hairless
sug_SANGER_5_FBgn0033782
Fly_Factor_Survey
Drosophila melanogaster
sug_SOLEXA_5_FBgn0033782
Fly_Factor_Survey
Drosophila melanogaster
SUH
Hocomoco
M00365
human, Homo sapiens.
SuH_FlyReg_FBgn0004837
Fly_Factor_Survey
Drosophila melanogaster
suHw_FlyReg_FBgn0003567
Fly_Factor_Survey
Drosophila melanogaster
SUM1
Jaspar
MA0398.1
Saccharomyces cerevisiae
Other
Sum1
UniPROBE
UP00341
Saccharomyces cerevisiae
Transcriptional repressor required for mitotic repression of middle sporulation-specific genes; involved in telomere maintenance; regulated by the pachytene checkpoint
Ty1 enhancer activator required for full levels of Ty enhancer-mediated transcription
Zn2Cys6
TEAD1
Jaspar
MA0090.1
Homo sapiens
Helix-Turn-Helix
TEAD1
Hocomoco
M00373
human, Homo sapiens.
TEAD1.p2
SwissRegulon
Homo sapiens; Mus musculus
TEA domain family member 1 (SV40 transcriptional enhancer factor);TEA domain family member 2;TEAD3 TEA domain family member 3;NM_003213;NM_201441;NM_201443
TEAD3
Hocomoco
M00374
human, Homo sapiens.
TEAD4
Hocomoco
M00375
human, Homo sapiens.
TEC1
Jaspar
MA0406.1
Saccharomyces cerevisiae
Helix-Turn-Helix
Tec1
UniPROBE
UP00340
Saccharomyces cerevisiae
Transcription factor required for full Ty1 epxression; Ty1-mediated gene activation; and haploid invasive and diploid pseudohyphal growth; TEA/ATTS DNA-binding domain family member
TEA
TEF
Hocomoco
M00376
human, Homo sapiens.
TEIL
Transfac
M00502
Nicotiana tabacum
TF65
Hocomoco
M00377
human, Homo sapiens.
TF7L2
Hocomoco
M00378
human, Homo sapiens.
TFAP2_A-C_.p2
SwissRegulon
Homo sapiens; Mus musculus
transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma);transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TFAP2A
Jaspar
MA0003.1
Homo sapiens
Zipper-Type
TFAP2B.p2
SwissRegulon
Homo sapiens; Mus musculus
transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
TFAP4
Hocomoco
M00379
human, Homo sapiens.
TFAP4.p2
SwissRegulon
Homo sapiens; Mus musculus
transcription factor AP-4 (activating enhancer binding protein 4)
Serine-rich protein that contains a basic-helix-loop-helix (bHLH) DNA binding motif
HLH
TYY1
Hocomoco
M00394
human, Homo sapiens.
UBIP1
Hocomoco
M00395
human, Homo sapiens.
Ubx
Jaspar
MA0094.2
Drosophila melanogaster
Helix-Turn-Helix
Ubx
Transfac
M00018
Drosophila pseudoobscura
Ultrabithorax
Ubx_Cell_FBgn0003944
Fly_Factor_Survey
Drosophila melanogaster
Ubx_FlyReg_FBgn0003944
Fly_Factor_Survey
Drosophila melanogaster
Ubx_SOLEXA_FBgn0003944
Fly_Factor_Survey
Drosophila melanogaster
UGA3
Jaspar
MA0410.1
Saccharomyces cerevisiae
Zinc-coordinating
UME6
Jaspar
MA0412.1
Saccharomyces cerevisiae
Zinc-coordinating
Ume6
UniPROBE
UP00334
Saccharomyces cerevisiae
Key transcriptional regulator of early meiotic genes; binds URS1 upstream regulatory sequence; couples metabolic responses to nutritional cues with initiation and progression of meiosis; forms comp...
Zn2Cys6
unc-4
Jaspar
MA0250.1
Drosophila melanogaster
Helix-Turn-Helix
Unc4_Cell_FBgn0024184
Fly_Factor_Survey
Drosophila melanogaster
Unc4_SOLEXA_FBgn0024184
Fly_Factor_Survey
Drosophila melanogaster
Uncx4.1
UniPROBE
UP00142
Mus musculus
Unc4.1 homeobox (C. elegans)
Homeo
unpg
Jaspar
MA0251.1
Drosophila melanogaster
Helix-Turn-Helix
Unpg_Cell_FBgn0015561
Fly_Factor_Survey
Drosophila melanogaster
Unpg_SOLEXA_FBgn0015561
Fly_Factor_Survey
Drosophila melanogaster
UPC2
Jaspar
MA0411.1
Saccharomyces cerevisiae
Zinc-coordinating
USF
Transfac
M00121
Cricetulus sp
upstream stimulating factor
USF
Transfac
M00122
Cricetulus sp
upstream stimulating factor
USF
Transfac
M00187
Cricetulus sp
upstream stimulating factor
USF
Transfac
M00217
Cricetulus sp
USF binding site
Usf_SANGER_5_FBgn0029711
Fly_Factor_Survey
Drosophila melanogaster
USF1
Jaspar
MA0093.1
Homo sapiens
Zipper-Type
USF1
Hocomoco
M00396
human, Homo sapiens.
USF2
Hocomoco
M00397
human, Homo sapiens.
usp
Jaspar
MA0016.1
Drosophila melanogaster
Zinc-coordinating
usp_SANGER_5_FBgn0003964
Fly_Factor_Survey
Drosophila melanogaster
USV1
Jaspar
MA0413.1
Saccharomyces cerevisiae
Zinc-coordinating
Usv1
UniPROBE
UP00343
Saccharomyces cerevisiae
Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in protein folding; ATP binding; and cell wall biosynthesis
zf-C2H2
v-ErbA
Transfac
M00239
avian erythroblastosis virus
viral homolog of thyroid hormone receptor alpha1
v-Jun
Transfac
M00036
avian sarcoma virus 17
v-Jun
v-Maf
Transfac
M00035
avian musculoaponeurotic fibrosarcoma virus
v-Maf
v-Myb
Transfac
M00003
avian myeloblastosis virus
v-Myb
v-Myb
Transfac
M00227
avian myeloblastosis virus
v-Myb
Vax1
UniPROBE
UP00215
Mus musculus
ventral anterior homeobox containing gene 1
Homeo
Vax2
UniPROBE
UP00106
Mus musculus
ventral anterior homeobox containing gene 2
Homeo
VBP
Transfac
M00228
Gallus gallus
PAR-type chicken vitellogenin promoter-binding protein
VDR
Hocomoco
M00398
human, Homo sapiens.
VDR
Hocomoco
M00399
human, Homo sapiens.
vfl_SANGER_5_FBgn0259789
Fly_Factor_Survey
Drosophila melanogaster
vfl_SOLEXA_5_FBgn0259789
Fly_Factor_Survey
Drosophila melanogaster
vis
Jaspar
MA0252.1
Drosophila melanogaster
Helix-Turn-Helix
Vis_Cell_FBgn0033748
Fly_Factor_Survey
Drosophila melanogaster
Vis_SOLEXA_FBgn0033748
Fly_Factor_Survey
Drosophila melanogaster
vnd
Jaspar
MA0253.1
Drosophila melanogaster
Helix-Turn-Helix
Vnd_Cell_FBgn0003986
Fly_Factor_Survey
Drosophila melanogaster
vnd_FlyReg_FBgn0003986
Fly_Factor_Survey
Drosophila melanogaster
Vnd_SOLEXA_FBgn0003986
Fly_Factor_Survey
Drosophila melanogaster
vri_SANGER_5_FBgn0016076
Fly_Factor_Survey
Drosophila melanogaster
Vsx1
Jaspar
MA0181.1
Drosophila melanogaster
Helix-Turn-Helix
Vsx1
UniPROBE
UP00141
Mus musculus
visual system homeobox 1 homolog (zebrafish)
Homeo
VSX1-2.p2
SwissRegulon
Homo sapiens; Mus musculus
visual system homeobox 2;visual system homeobox 1
Vsx2
Jaspar
MA0180.1
Drosophila melanogaster
Helix-Turn-Helix
VSX2
Hocomoco
M00400
human, Homo sapiens.
vvl
Jaspar
MA0254.1
Drosophila melanogaster
Helix-Turn-Helix
vvl_FlyReg_FBgn0086680
Fly_Factor_Survey
Drosophila melanogaster
vvl_SOLEXA_5_FBgn0086680
Fly_Factor_Survey
Drosophila melanogaster
wor_SANGER_2.5_FBgn0001983
Fly_Factor_Survey
Drosophila melanogaster
wor_SOLEXA_2.5_FBgn0001983
Fly_Factor_Survey
Drosophila melanogaster
WT1
Hocomoco
M00401
human, Homo sapiens.
XBP-1
Transfac
M00251
Homo sapiens
X-box-binding protein 1
XBP1
Jaspar
MA0414.1
Saccharomyces cerevisiae
Ig-fold
Xbp1
UniPROBE
UP00330
Saccharomyces cerevisiae
Transcriptional repressor that binds to promoter sequences of the cyclin genes; CYS3; and SMF2; expression is induced by stress or starvation during mitosis; and late in meiosis; member of the Swi4...
Putative protein of unknown function with similarity to Pip2p; an oleate-specific transcriptional activator of peroxisome proliferation; YLL054C is not an essential gene
Zn2Cys6
YLR278C
Jaspar
MA0430.1
Saccharomyces cerevisiae
Zinc-coordinating
YML081W
Jaspar
MA0431.1
Saccharomyces cerevisiae
Zinc-coordinating
Yml081w
UniPROBE
UP00289
Saccharomyces cerevisiae
Putative protein of unknown function
zf-C2H2
YNR063W
Jaspar
MA0432.1
Saccharomyces cerevisiae
Zinc-coordinating
Ynr063w
UniPROBE
UP00292
Saccharomyces cerevisiae
Putative zinc-cluster protein of unknown function
Zn2Cys6
YOX1
Jaspar
MA0433.1
Saccharomyces cerevisiae
Helix-Turn-Helix
Yox1
UniPROBE
UP00274
Saccharomyces cerevisiae
Homeodomain-containing transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycl...
Homeo
YPR013C
Jaspar
MA0434.1
Saccharomyces cerevisiae
Zinc-coordinating
Ypr013c
UniPROBE
UP00311
Saccharomyces cerevisiae
Putative zinc finger protein
zf-C2H2
YPR015C
Jaspar
MA0435.1
Saccharomyces cerevisiae
Zinc-coordinating
Ypr015c
UniPROBE
UP00276
Saccharomyces cerevisiae
Hypothetical protein
zf-C2H2
YPR022C
Jaspar
MA0436.1
Saccharomyces cerevisiae
Zinc-coordinating
YPR196W
Jaspar
MA0437.1
Saccharomyces cerevisiae
Zinc-coordinating
Ypr196w
UniPROBE
UP00314
Saccharomyces cerevisiae
nuclear protein (putative)
Zn2Cys6
YRM1
Jaspar
MA0438.1
Saccharomyces cerevisiae
Zinc-coordinating
Yrm1
UniPROBE
UP00295
Saccharomyces cerevisiae
Zn2-Cys6 zinc-finger transcription factor that activates genes involved in multidrug resistance; paralog of Yrr1p; acting on an overlapping set of target genes
Zn2Cys6
YRR1
Jaspar
MA0439.1
Saccharomyces cerevisiae
Zinc-coordinating
Yrr1
UniPROBE
UP00310
Saccharomyces cerevisiae
Zn2-Cys6 zinc-finger transcription factor that activates genes involved in multidrug resistance; paralog of Yrm1p; acting on an overlapping set of target genes
Zn2Cys6
YY1
Jaspar
MA0095.1
Homo sapiens
Zinc-coordinating
YY1
Transfac
M00059
Mus musculus
Yin and Yang 1
YY1
Transfac
M00069
Mus musculus
Yin and Yang 1
YY1.p2
SwissRegulon
Homo sapiens; Mus musculus
YY1 transcription factor
z
Jaspar
MA0255.1
Drosophila melanogaster
Helix-Turn-Helix
z_FlyReg_FBgn0004050
Fly_Factor_Survey
Drosophila melanogaster
ZAP1
Jaspar
MA0440.1
Saccharomyces cerevisiae
Zinc-coordinating
ZBT7A
Hocomoco
M00404
human, Homo sapiens.
ZBT7B
Hocomoco
M00405
human, Homo sapiens.
Zbtb12
UniPROBE
UP00019
Mus musculus
zinc finger and BTB domain containing 12: Mus musculus zinc finger and BTB domain containing 12
Zinc finger protein 691: Mus musculus similar to hypothetical protein LOC51058 (LOC242652); mRNA
zf-C2H2
Zfp740
UniPROBE
UP00022
Mus musculus
Zinc finger protein 740
zf-C2H2
Zfx
Jaspar
MA0146.1
Mus musculus
Zinc-coordinating
ZFX
Hocomoco
M00413
human, Homo sapiens.
Zic1
Transfac
M00448
Mus musculus
zinc finger protein of the cerebellum 1
Zic1
UniPROBE
UP00102
Mus musculus
Zinc finger protein of the cerebellum 1: Mus musculus similar to zic protein member 1 (Zic1); mRNA
zf-C2H2
ZIC1
Hocomoco
M00414
human, Homo sapiens.
ZIC1..3.p2
SwissRegulon
Homo sapiens; Mus musculus
Zic family member 1 (odd-paired homolog; Drosophila);Zic family member 2 (odd-paired homolog; Drosophila);Zic family member 3 (odd-paired homolog; Drosophila)
Zic2
Transfac
M00449
Homo sapiens
zinc finger protein of the cerebellum 2
Zic2
UniPROBE
UP00057
Mus musculus
Zic finger protein of the cerebellum 2: Mus musculus Zic finger protein of the cerebellum 2 (Zic2)
zf-C2H2
ZIC2
Hocomoco
M00415
human, Homo sapiens.
Zic3
Transfac
M00450
Mus musculus
zinc finger protein of the cerebellum 3
Zic3
UniPROBE
UP00006
Mus musculus
zinc finger protein of the cerebellum 3: Mus musculus zinc finger protein of the cerebellum 3; mRNA (cDNA clone IMAGE:30112694); partial cds
zf-C2H2
ZIC3
Hocomoco
M00416
human, Homo sapiens.
ZID
Transfac
M00085
Homo sapiens
zinc finger with interaction domain
Zif268
UniPROBE
UP00400
Mus musculus
Transcription factor Zif268
zf-C2H2
ZMS1
Jaspar
MA0441.1
Saccharomyces cerevisiae
Zinc-coordinating
ZN143
Hocomoco
M00417
human, Homo sapiens.
ZN148
Hocomoco
M00418
human, Homo sapiens.
ZN219
Hocomoco
M00419
human, Homo sapiens.
ZN238
Hocomoco
M00420
human, Homo sapiens.
ZN333
Hocomoco
M00421
human, Homo sapiens.
ZN350
Hocomoco
M00422
human, Homo sapiens.
ZN384
Hocomoco
M00423
human, Homo sapiens.
ZN423
Hocomoco
M00424
human, Homo sapiens.
ZN589
Hocomoco
M00425
human, Homo sapiens.
znf143
Jaspar
MA0088.1
Xenopus laevis
Zinc-coordinating
ZNF143.p2
SwissRegulon
Homo sapiens; Mus musculus
zinc finger protein 143
ZNF148.p2
SwissRegulon
Homo sapiens; Mus musculus
zinc finger protein 148
ZNF238.p2
SwissRegulon
Homo sapiens; Mus musculus
zinc finger protein 238
ZNF354C
Jaspar
MA0130.1
Homo sapiens
Zinc-coordinating
ZNF384.p2
SwissRegulon
Homo sapiens; Mus musculus
zinc finger protein 384
ZNF423.p2
SwissRegulon
Homo sapiens; Mus musculus
zinc finger protein 423
Zscan4
UniPROBE
UP00026
Mus musculus
zinc finger and SCAN domain containing 4: Mus musculus BAC clone RP23-35L23 from chromosome 7; complete sequence.